RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
LCN1-201ENST00000263598 TGFB2P61812 414 aa12.36□□□□□ -0.43
LCN1-201ENST00000263598 TRAPPC3LQ5T215 181 aa12.36□□□□□ -0.43
LCN1-201ENST00000263598 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
LCN1-201ENST00000263598 MAP2P11137 1827 aaKnown RBP12.36□□□□□ -0.43
LCN1-201ENST00000263598 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
LCN1-201ENST00000263598 ERVV-2B6SEH9 535 aa12.35□□□□□ -0.43
LCN1-201ENST00000263598 HSP90AB1P08238 724 aaKnown RBP12.35□□□□□ -0.43
LCN1-201ENST00000263598 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
LCN1-201ENST00000263598 ADRA2BP18089 450 aa12.34□□□□□ -0.43
LCN1-201ENST00000263598 TNNT2P45379 298 aaPredicted RBP12.34□□□□□ -0.43
LCN1-201ENST00000263598 DCAF5Q96JK2 942 aa12.34□□□□□ -0.43
LCN1-201ENST00000263598 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
LCN1-201ENST00000263598 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
LCN1-201ENST00000263598 KDRP35968 1356 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 KIF3CO14782 793 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 RFC4P35249 363 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.44
LCN1-201ENST00000263598 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 BCS1LQ9Y276 419 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
LCN1-201ENST00000263598 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
LCN1-201ENST00000263598 CABP4P57796 275 aa12.32□□□□□ -0.44
LCN1-201ENST00000263598 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
LCN1-201ENST00000263598 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
LCN1-201ENST00000263598 ARHGEF1Q92888 912 aaKnown RBP12.32□□□□□ -0.44
LCN1-201ENST00000263598 PARP3Q9Y6F1 533 aa12.32□□□□□ -0.44
LCN1-201ENST00000263598 CICQ96RK0 1608 aaPredicted RBP12.32□□□□□ -0.44
LCN1-201ENST00000263598 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
LCN1-201ENST00000263598 RPS6KA4O75676 772 aa12.31□□□□□ -0.44
LCN1-201ENST00000263598 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
LCN1-201ENST00000263598 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
LCN1-201ENST00000263598 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
LCN1-201ENST00000263598 TOMM70O94826 608 aa12.3□□□□□ -0.44
LCN1-201ENST00000263598 GYS1P13807 737 aa12.3□□□□□ -0.44
LCN1-201ENST00000263598 APLP1P51693 650 aa12.3□□□□□ -0.44
LCN1-201ENST00000263598 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
LCN1-201ENST00000263598 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 FCHSD2O94868 740 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 DPEP1P16444 411 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 MTHFSP49914 203 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
LCN1-201ENST00000263598 KIF13BQ9NQT8 1826 aa12.29□□□□□ -0.44
LCN1-201ENST00000263598 PTCD1O75127 700 aaKnown RBP12.28□□□□□ -0.44
LCN1-201ENST00000263598 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
LCN1-201ENST00000263598 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
LCN1-201ENST00000263598 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.45
LCN1-201ENST00000263598 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
LCN1-201ENST00000263598 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
LCN1-201ENST00000263598 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
LCN1-201ENST00000263598 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
LCN1-201ENST00000263598 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
LCN1-201ENST00000263598 PANK3Q9H999 370 aa12.26□□□□□ -0.45
LCN1-201ENST00000263598 COL5A3P25940 1745 aaPredicted RBP12.25□□□□□ -0.45
LCN1-201ENST00000263598 KCNA3P22001 575 aa12.25□□□□□ -0.45
LCN1-201ENST00000263598 EIF4G2P78344 907 aaKnown RBP eCLIP12.25□□□□□ -0.45
LCN1-201ENST00000263598 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
LCN1-201ENST00000263598 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
LCN1-201ENST00000263598 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
LCN1-201ENST00000263598 NMRK2Q9NPI5 230 aa12.25□□□□□ -0.45
LCN1-201ENST00000263598 FKBP8Q14318 412 aa12.24□□□□□ -0.45
LCN1-201ENST00000263598 SULT6B1Q6IMI4 303 aa12.24□□□□□ -0.45
LCN1-201ENST00000263598 KDM2BQ8NHM5 1336 aa12.24□□□□□ -0.45
LCN1-201ENST00000263598 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
LCN1-201ENST00000263598 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
LCN1-201ENST00000263598 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
LCN1-201ENST00000263598 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
LCN1-201ENST00000263598 RBM46Q8TBY0 533 aaKnown RBP12.23□□□□□ -0.45
LCN1-201ENST00000263598 ZPR1O75312 459 aa12.22□□□□□ -0.45
LCN1-201ENST00000263598 FSTL1Q12841 308 aa12.22□□□□□ -0.45
LCN1-201ENST00000263598 DNAJC5GQ8N7S2 189 aa12.22□□□□□ -0.45
LCN1-201ENST00000263598 RNF181Q9P0P0 153 aa12.22□□□□□ -0.45
LCN1-201ENST00000263598 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
LCN1-201ENST00000263598 HSPA5P11021 654 aaKnown RBP12.21□□□□□ -0.45
LCN1-201ENST00000263598 DDR1Q08345 913 aa12.21□□□□□ -0.45
LCN1-201ENST00000263598 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
LCN1-201ENST00000263598 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
LCN1-201ENST00000263598 KNSTRNQ9Y448 316 aa12.21□□□□□ -0.45
LCN1-201ENST00000263598 TM4SF1P30408 202 aa12.2□□□□□ -0.46
LCN1-201ENST00000263598 CHRNA5P30532 468 aa12.2□□□□□ -0.46
LCN1-201ENST00000263598 IL13P35225 146 aa12.2□□□□□ -0.46
LCN1-201ENST00000263598 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
LCN1-201ENST00000263598 BRCA1P38398 1863 aaKnown RBP12.2□□□□□ -0.46
LCN1-201ENST00000263598 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
LCN1-201ENST00000263598 ARFGEF1Q9Y6D6 1849 aa12.19□□□□□ -0.46
LCN1-201ENST00000263598 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
LCN1-201ENST00000263598 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
LCN1-201ENST00000263598 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
LCN1-201ENST00000263598 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
LCN1-201ENST00000263598 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
LCN1-201ENST00000263598 TJP1Q07157 1748 aa12.18□□□□□ -0.46
LCN1-201ENST00000263598 RRAGCQ9HB90 399 aa12.18□□□□□ -0.46
LCN1-201ENST00000263598 ZC3H4Q9UPT8 1303 aaKnown RBP12.17□□□□□ -0.46
LCN1-201ENST00000263598 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
LCN1-201ENST00000263598 KLRG1Q96E93 195 aa12.17□□□□□ -0.46
LCN1-201ENST00000263598 LGR6Q9HBX8 967 aa12.17□□□□□ -0.46
LCN1-201ENST00000263598 NARFQ9UHQ1 456 aa12.17□□□□□ -0.46
LCN1-201ENST00000263598 RNMTO43148 476 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms