RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CDKL5O76039 1030 aa14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 CCDC175P0C221 793 aa14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 C16orf45Q96MC5 204 aaPredicted RBP14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 CKAP2LQ8IYA6 745 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 BIN1O00499 593 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 IMMTQ16891 758 aaKnown RBP14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 WASHC2AQ641Q2 1341 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 FKBP15Q5T1M5 1219 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
ARFGEF1-201ENST00000262215 CCDC160A6NGH7 325 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 MCM4P33991 863 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 PAIP2Q9BPZ3 127 aaKnown RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 SRCIN1Q9C0H9 1055 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 TOP1P11387 765 aaKnown RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 GCOM1H8Y6P7 765 aaPredicted RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 TATP17735 454 aaPredicted RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 MIS18AQ9NYP9 233 aa14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 SMARCA5O60264 1052 aaPredicted RBP14.48□□□□□ -0.09
ARFGEF1-201ENST00000262215 SEC63Q9UGP8 760 aaKnown RBP14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 TCERG1LQ5VWI1 586 aa14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 CRACR2BQ8N4Y2 399 aaPredicted RBP14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 NOP2P46087 812 aaKnown RBP14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 ZSCAN25Q6NSZ9 544 aa14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 CCDC144CPQ8IYA2 1237 aa14.47□□□□□ -0.09
ARFGEF1-201ENST00000262215 LMAN1P49257 510 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 CTR9Q6PD62 1173 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 TSG101Q99816 390 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 MYO1BO43795 1136 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 TTLL12Q14166 644 aaPredicted RBP14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 CHD1LQ86WJ1 897 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 FERMT2Q96AC1 680 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 CEP126Q9P2H0 1117 aa14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 BMS1Q14692 1282 aaKnown RBP14.46□□□□□ -0.09
ARFGEF1-201ENST00000262215 PPP4R3AQ6IN85 833 aa14.46□□□□□ -0.1
ARFGEF1-201ENST00000262215 GBP3Q9H0R5 595 aa14.46□□□□□ -0.1
ARFGEF1-201ENST00000262215 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 ZNF530Q6P9A1 599 aaPredicted RBP14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 SPATA24Q86W54 205 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 ZNF354CQ86Y25 554 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 EXOC6BQ9Y2D4 811 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 PRPF40BQ6NWY9 871 aaKnown RBP14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 PPP1R14CQ8TAE6 165 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 ECM2O94769 699 aaPredicted RBP14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 PAFAH1B1P43034 410 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 PIP4K2BP78356 416 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 RGS22Q8NE09 1264 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 GDPD2Q9HCC8 539 aa14.45□□□□□ -0.1
ARFGEF1-201ENST00000262215 RANBP6O60518 1105 aaKnown RBP14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 FBF1Q8TES7 1133 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 TNIP1Q15025 636 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 ZSCAN12O43309 604 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 FERP16591 822 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 MXRA7P84157 204 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 CCDC7Q96M83 1385 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 PRC1O43663 620 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 CCT2P78371 535 aaKnown RBP14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 BOLA2Q9H3K6 86 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 USP25Q9UHP3 1055 aa14.44□□□□□ -0.1
ARFGEF1-201ENST00000262215 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 VPS36Q86VN1 386 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 FSD2A1L4K1 749 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 MRPS9P82933 396 aaKnown RBP14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 METTL24Q5JXM2 366 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 CTNNA3Q9UI47 895 aa14.43□□□□□ -0.1
ARFGEF1-201ENST00000262215 MTIF2P46199 727 aaKnown RBP14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 CCT4P50991 539 aaKnown RBP14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 HSP90AA4PQ58FG1 418 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 TMC6Q7Z403 805 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 TXNDC2Q86VQ3 553 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 TMCO4Q5TGY1 634 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 JADE2Q9NQC1 790 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 WASF1Q92558 559 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 MNAT1P51948 309 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 CCDC150Q8NCX0 1101 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 PABPN1LA6NDY0 278 aaKnown RBP14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 BTBD11A6QL63 1104 aa14.42□□□□□ -0.1
ARFGEF1-201ENST00000262215 IDEP14735 1019 aa14.41□□□□□ -0.1
ARFGEF1-201ENST00000262215 TMOD2Q9NZR1 351 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms