RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 SEPT11Q9NVA2 429 aaKnown RBP17.4■□□□□ 0.38
C12orf49-201ENST00000261318 URI1O94763 535 aaPredicted RBP17.4■□□□□ 0.38
C12orf49-201ENST00000261318 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
C12orf49-201ENST00000261318 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 NEMFO60524 1076 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
C12orf49-201ENST00000261318 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
C12orf49-201ENST00000261318 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.38
C12orf49-201ENST00000261318 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.38
C12orf49-201ENST00000261318 WWC2Q6AWC2 1192 aa17.39■□□□□ 0.37
C12orf49-201ENST00000261318 DYNC1I1O14576 645 aa17.39■□□□□ 0.37
C12orf49-201ENST00000261318 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
C12orf49-201ENST00000261318 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
C12orf49-201ENST00000261318 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
C12orf49-201ENST00000261318 SPA17Q15506 151 aa17.39■□□□□ 0.37
C12orf49-201ENST00000261318 DHX37Q8IY37 1157 aaKnown RBP17.38■□□□□ 0.37
C12orf49-201ENST00000261318 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
C12orf49-201ENST00000261318 TXNDC2Q86VQ3 553 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
C12orf49-201ENST00000261318 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
C12orf49-201ENST00000261318 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 GIMAP7Q8NHV1 300 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 NAIPQ13075 1403 aa17.38■□□□□ 0.37
C12orf49-201ENST00000261318 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
C12orf49-201ENST00000261318 PPP4R3BQ5MIZ7 849 aa17.37■□□□□ 0.37
C12orf49-201ENST00000261318 GSDMDP57764 484 aa17.37■□□□□ 0.37
C12orf49-201ENST00000261318 ADCY5O95622 1261 aa17.37■□□□□ 0.37
C12orf49-201ENST00000261318 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
C12orf49-201ENST00000261318 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
C12orf49-201ENST00000261318 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
C12orf49-201ENST00000261318 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
C12orf49-201ENST00000261318 LIMCH1Q9UPQ0 1083 aa17.36■□□□□ 0.37
C12orf49-201ENST00000261318 SSBP05455 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
C12orf49-201ENST00000261318 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
C12orf49-201ENST00000261318 POLR3GO15318 223 aaPredicted RBP17.36■□□□□ 0.37
C12orf49-201ENST00000261318 SPG7Q9UQ90 795 aa17.36■□□□□ 0.37
C12orf49-201ENST00000261318 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
C12orf49-201ENST00000261318 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
C12orf49-201ENST00000261318 FAM107BQ9H098 131 aa17.35■□□□□ 0.37
C12orf49-201ENST00000261318 TRMT1Q9NXH9 659 aaKnown RBP17.35■□□□□ 0.37
C12orf49-201ENST00000261318 HMGB1P09429 215 aaKnown RBP17.35■□□□□ 0.37
C12orf49-201ENST00000261318 CKAP2LQ8IYA6 745 aa17.35■□□□□ 0.37
C12orf49-201ENST00000261318 C8orf76Q96K31 380 aa17.35■□□□□ 0.37
C12orf49-201ENST00000261318 KLHL10Q6JEL2 608 aa17.35■□□□□ 0.37
C12orf49-201ENST00000261318 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
C12orf49-201ENST00000261318 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
C12orf49-201ENST00000261318 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
C12orf49-201ENST00000261318 DYDC1Q8WWB3 177 aa17.34■□□□□ 0.37
C12orf49-201ENST00000261318 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
C12orf49-201ENST00000261318 MAP2K1Q02750 393 aaPredicted RBP17.34■□□□□ 0.37
C12orf49-201ENST00000261318 PRIMPOLQ96LW4 560 aa17.34■□□□□ 0.37
C12orf49-201ENST00000261318 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
C12orf49-201ENST00000261318 STX1AQ16623 288 aa17.33■□□□□ 0.37
C12orf49-201ENST00000261318 AIDAQ96BJ3 306 aa17.33■□□□□ 0.37
C12orf49-201ENST00000261318 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.37
C12orf49-201ENST00000261318 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
C12orf49-201ENST00000261318 RAI14Q9P0K7 980 aa17.33■□□□□ 0.36
C12orf49-201ENST00000261318 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 KLHL40Q2TBA0 621 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
C12orf49-201ENST00000261318 SLC52A1Q9NWF4 448 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
C12orf49-201ENST00000261318 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 UBE2HP62256 183 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 OSCARQ8IYS5 282 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 NCOA1Q15788 1441 aa17.32■□□□□ 0.36
C12orf49-201ENST00000261318 BMP2KLQ5H9B9 411 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 ZSCAN23Q3MJ62 389 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 NUP88Q99567 741 aaPredicted RBP17.31■□□□□ 0.36
C12orf49-201ENST00000261318 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 PPP1R12BO60237 982 aaPredicted RBP17.31■□□□□ 0.36
C12orf49-201ENST00000261318 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 STX6O43752 255 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
C12orf49-201ENST00000261318 SNW1Q13573 536 aaKnown RBP17.3■□□□□ 0.36
C12orf49-201ENST00000261318 LUZP1Q86V48 1076 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 GOLGA6L9A6NEM1 432 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 PIBF1Q8WXW3 757 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 TRIM27P14373 513 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 CAVIN2O95810 425 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 CACNA2D4Q7Z3S7 1137 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 CCDC91Q7Z6B0 441 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 PAF1Q8N7H5 531 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 CNNM3Q8NE01 707 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
C12orf49-201ENST00000261318 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
C12orf49-201ENST00000261318 GDPD2Q9HCC8 539 aa17.3■□□□□ 0.36
C12orf49-201ENST00000261318 CEP135Q66GS9 1140 aa17.29■□□□□ 0.36
C12orf49-201ENST00000261318 C11orf95C9JLR9 678 aaPredicted RBP17.29■□□□□ 0.36
C12orf49-201ENST00000261318 CCDC113Q9H0I3 377 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms