RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
LIN7A-201ENST00000261203 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
LIN7A-201ENST00000261203 SIK1P57059 783 aa12.57□□□□□ -0.4
LIN7A-201ENST00000261203 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
LIN7A-201ENST00000261203 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
LIN7A-201ENST00000261203 IL13P35225 146 aa12.56□□□□□ -0.4
LIN7A-201ENST00000261203 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
LIN7A-201ENST00000261203 COL23A1Q86Y22 540 aaPredicted RBP12.56□□□□□ -0.4
LIN7A-201ENST00000261203 AK7Q96M32 723 aa12.56□□□□□ -0.4
LIN7A-201ENST00000261203 SCN11AQ9UI33 1791 aa12.56□□□□□ -0.4
LIN7A-201ENST00000261203 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
LIN7A-201ENST00000261203 MTHFSP49914 203 aa12.55□□□□□ -0.4
LIN7A-201ENST00000261203 C1orf141Q5JVX7 400 aa12.55□□□□□ -0.4
LIN7A-201ENST00000261203 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
LIN7A-201ENST00000261203 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
LIN7A-201ENST00000261203 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
LIN7A-201ENST00000261203 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
LIN7A-201ENST00000261203 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
LIN7A-201ENST00000261203 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
LIN7A-201ENST00000261203 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 SSFA2P28290 1259 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 CABP4P57796 275 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 ATG3Q9NT62 314 aa12.53□□□□□ -0.4
LIN7A-201ENST00000261203 COL5A3P25940 1745 aaPredicted RBP12.53□□□□□ -0.4
LIN7A-201ENST00000261203 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
LIN7A-201ENST00000261203 LINC00116Q8NCU8 138 aa12.52□□□□□ -0.41
LIN7A-201ENST00000261203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.51□□□□□ -0.41
LIN7A-201ENST00000261203 ZBTB22O15209 634 aa12.51□□□□□ -0.41
LIN7A-201ENST00000261203 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
LIN7A-201ENST00000261203 ITPK1Q13572 414 aa12.51□□□□□ -0.41
LIN7A-201ENST00000261203 GNPATO15228 680 aa12.5□□□□□ -0.41
LIN7A-201ENST00000261203 PHF14O94880 888 aa12.5□□□□□ -0.41
LIN7A-201ENST00000261203 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
LIN7A-201ENST00000261203 MSL1Q68DK7 614 aa12.5□□□□□ -0.41
LIN7A-201ENST00000261203 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
LIN7A-201ENST00000261203 GPR162Q16538 588 aa12.49□□□□□ -0.41
LIN7A-201ENST00000261203 AMIGO3Q86WK7 504 aa12.49□□□□□ -0.41
LIN7A-201ENST00000261203 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
LIN7A-201ENST00000261203 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
LIN7A-201ENST00000261203 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
LIN7A-201ENST00000261203 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 HMOX1P09601 288 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
LIN7A-201ENST00000261203 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 CD2APQ9Y5K6 639 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
LIN7A-201ENST00000261203 MRC1P22897 1456 aa12.47□□□□□ -0.41
LIN7A-201ENST00000261203 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
LIN7A-201ENST00000261203 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
LIN7A-201ENST00000261203 RTCBQ9Y3I0 505 aaKnown RBP12.47□□□□□ -0.41
LIN7A-201ENST00000261203 TJP1Q07157 1748 aa12.47□□□□□ -0.41
LIN7A-201ENST00000261203 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
LIN7A-201ENST00000261203 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
LIN7A-201ENST00000261203 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
LIN7A-201ENST00000261203 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
LIN7A-201ENST00000261203 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
LIN7A-201ENST00000261203 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
LIN7A-201ENST00000261203 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
LIN7A-201ENST00000261203 CFAP53Q96M91 514 aa12.45□□□□□ -0.42
LIN7A-201ENST00000261203 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
LIN7A-201ENST00000261203 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
LIN7A-201ENST00000261203 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
LIN7A-201ENST00000261203 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
LIN7A-201ENST00000261203 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
LIN7A-201ENST00000261203 RPS6KA4O75676 772 aa12.44□□□□□ -0.42
LIN7A-201ENST00000261203 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
LIN7A-201ENST00000261203 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
LIN7A-201ENST00000261203 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
LIN7A-201ENST00000261203 RFC4P35249 363 aa12.43□□□□□ -0.42
LIN7A-201ENST00000261203 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
LIN7A-201ENST00000261203 NLGN1Q8N2Q7 840 aa12.43□□□□□ -0.42
LIN7A-201ENST00000261203 LGR6Q9HBX8 967 aa12.43□□□□□ -0.42
LIN7A-201ENST00000261203 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
LIN7A-201ENST00000261203 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
LIN7A-201ENST00000261203 ARHGEF1Q92888 912 aaKnown RBP12.42□□□□□ -0.42
LIN7A-201ENST00000261203 NUDCQ9Y266 331 aa12.42□□□□□ -0.42
LIN7A-201ENST00000261203 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
LIN7A-201ENST00000261203 MMP10P09238 476 aa12.41□□□□□ -0.42
LIN7A-201ENST00000261203 KCPQ6ZWJ8 1503 aa12.41□□□□□ -0.42
LIN7A-201ENST00000261203 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
LIN7A-201ENST00000261203 GYS1P13807 737 aa12.39□□□□□ -0.43
LIN7A-201ENST00000261203 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
LIN7A-201ENST00000261203 TEFQ10587 303 aa12.39□□□□□ -0.43
LIN7A-201ENST00000261203 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
LIN7A-201ENST00000261203 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
LIN7A-201ENST00000261203 KIAA1551Q9HCM1 1747 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 SLC39A6Q13433 755 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
LIN7A-201ENST00000261203 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
LIN7A-201ENST00000261203 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
LIN7A-201ENST00000261203 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
LIN7A-201ENST00000261203 C10orf71Q711Q0 1435 aa12.37□□□□□ -0.43
LIN7A-201ENST00000261203 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms