RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 H0YHG0 523 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 CAMK4Q16566 473 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 LARP1Q6PKG0 1096 aaKnown RBP18.62■□□□□ 0.57
SHTN1-201ENST00000260777 FERMT3Q86UX7 667 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 GPATCH8Q9UKJ3 1502 aaKnown RBP18.62■□□□□ 0.57
SHTN1-201ENST00000260777 PRM3Q9NNZ6 103 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 MCM5P33992 734 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 NUP133Q8WUM0 1156 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 ARHGAP45Q92619 1136 aa18.62■□□□□ 0.57
SHTN1-201ENST00000260777 ANO10Q9NW15 660 aa18.61■□□□□ 0.57
SHTN1-201ENST00000260777 NUCB1Q02818 461 aa18.61■□□□□ 0.57
SHTN1-201ENST00000260777 BAG4O95429 457 aaKnown RBP18.61■□□□□ 0.57
SHTN1-201ENST00000260777 KLHL40Q2TBA0 621 aa18.61■□□□□ 0.57
SHTN1-201ENST00000260777 AXDND1Q5T1B0 1012 aaPredicted RBP18.61■□□□□ 0.57
SHTN1-201ENST00000260777 TTC22Q5TAA0 569 aa18.61■□□□□ 0.57
SHTN1-201ENST00000260777 HMGB1P09429 215 aaKnown RBP18.61■□□□□ 0.57
SHTN1-201ENST00000260777 ODF2Q5BJF6 829 aa18.61■□□□□ 0.57
SHTN1-201ENST00000260777 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 LRRFIP2Q9Y608 721 aaKnown RBP18.6■□□□□ 0.57
SHTN1-201ENST00000260777 HSP90AB2PQ58FF8 381 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 F6X3S4 739 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 UBAC1Q9BSL1 405 aa18.6■□□□□ 0.57
SHTN1-201ENST00000260777 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
SHTN1-201ENST00000260777 CEP131Q9UPN4 1083 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 CTAGE5O15320 804 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 DNAAF4Q8WXU2 420 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 STRN4Q9NRL3 753 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 KRT18P05783 430 aaKnown RBP18.59■□□□□ 0.57
SHTN1-201ENST00000260777 TDO2P48775 406 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 AMOTQ4VCS5 1084 aa18.59■□□□□ 0.57
SHTN1-201ENST00000260777 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
SHTN1-201ENST00000260777 TTC21BQ7Z4L5 1316 aa18.58■□□□□ 0.57
SHTN1-201ENST00000260777 AKAP2Q9Y2D5 859 aa18.58■□□□□ 0.57
SHTN1-201ENST00000260777 CD109Q6YHK3 1445 aa18.58■□□□□ 0.56
SHTN1-201ENST00000260777 PTPN14Q15678 1187 aa18.58■□□□□ 0.56
SHTN1-201ENST00000260777 DEF6Q9H4E7 631 aa18.58■□□□□ 0.56
SHTN1-201ENST00000260777 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
SHTN1-201ENST00000260777 ANKLE2Q86XL3 938 aa18.58■□□□□ 0.56
SHTN1-201ENST00000260777 MBIPQ9NS73 344 aa18.58■□□□□ 0.56
SHTN1-201ENST00000260777 SFPQP23246 707 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHTN1-201ENST00000260777 FLIIQ13045 1269 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 IQCEQ6IPM2 695 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 BOLA2Q9H3K6 86 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 DDX19AQ9NUU7 478 aaKnown RBP18.57■□□□□ 0.56
SHTN1-201ENST00000260777 CFAP100Q494V2 611 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 CCDC181Q5TID7 509 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
SHTN1-201ENST00000260777 UBXN4Q92575 508 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
SHTN1-201ENST00000260777 POGZQ7Z3K3 1410 aa18.57■□□□□ 0.56
SHTN1-201ENST00000260777 PRAG1Q86YV5 1406 aa18.56■□□□□ 0.56
SHTN1-201ENST00000260777 UVSSAQ2YD98 709 aa18.56■□□□□ 0.56
SHTN1-201ENST00000260777 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
SHTN1-201ENST00000260777 RDXP35241 583 aaKnown RBP18.56■□□□□ 0.56
SHTN1-201ENST00000260777 XPCQ01831 940 aaPredicted RBP18.56■□□□□ 0.56
SHTN1-201ENST00000260777 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
SHTN1-201ENST00000260777 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
SHTN1-201ENST00000260777 ZSCAN12O43309 604 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 USP25Q9UHP3 1055 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 NEMFO60524 1076 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 ERLIN2O94905 339 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
SHTN1-201ENST00000260777 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 STX6O43752 255 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
SHTN1-201ENST00000260777 GOLGA6L10A6NI86 522 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 EPB41L2O43491 1005 aaKnown RBP18.54■□□□□ 0.56
SHTN1-201ENST00000260777 KIF18AQ8NI77 898 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 DBF4Q9UBU7 674 aaPredicted RBP18.54■□□□□ 0.56
SHTN1-201ENST00000260777 CLIP2Q9UDT6 1046 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
SHTN1-201ENST00000260777 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
SHTN1-201ENST00000260777 IDH1O75874 414 aaKnown RBP18.53■□□□□ 0.56
SHTN1-201ENST00000260777 SNX21Q969T3 373 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 IDI1Q13907 227 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 SYCP1Q15431 976 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
SHTN1-201ENST00000260777 ARHGAP29Q52LW3 1261 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 C8orf76Q96K31 380 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 MYD88Q99836 296 aa18.53■□□□□ 0.56
SHTN1-201ENST00000260777 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.56
SHTN1-201ENST00000260777 GJB2P29033 226 aa18.52■□□□□ 0.56
SHTN1-201ENST00000260777 ZFYVE27Q5T4F4 411 aa18.52■□□□□ 0.56
SHTN1-201ENST00000260777 MEX3CQ5U5Q3 659 aaKnown RBP18.52■□□□□ 0.56
SHTN1-201ENST00000260777 CCDC191Q8NCU4 936 aa18.52■□□□□ 0.56
SHTN1-201ENST00000260777 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
SHTN1-201ENST00000260777 UBE2HP62256 183 aa18.52■□□□□ 0.55
SHTN1-201ENST00000260777 TMCO3Q6UWJ1 677 aa18.52■□□□□ 0.55
SHTN1-201ENST00000260777 ZSCAN23Q3MJ62 389 aa18.52■□□□□ 0.55
SHTN1-201ENST00000260777 TSPYL1Q9H0U9 437 aa18.52■□□□□ 0.55
SHTN1-201ENST00000260777 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.55
SHTN1-201ENST00000260777 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
SHTN1-201ENST00000260777 CCDC8Q9H0W5 538 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms