RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 KDM6AO15550 1401 aaPredicted RBP23.02■■□□□ 1.28
CGREF1-201ENST00000260595 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
CGREF1-201ENST00000260595 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.01■■□□□ 1.27
CGREF1-201ENST00000260595 ATP6V1AP38606 617 aa23.01■■□□□ 1.27
CGREF1-201ENST00000260595 SSFA2P28290 1259 aa23■■□□□ 1.27
CGREF1-201ENST00000260595 MTHFSP49914 203 aa23■■□□□ 1.27
CGREF1-201ENST00000260595 GPR162Q16538 588 aa23■■□□□ 1.27
CGREF1-201ENST00000260595 SLC4A9Q96Q91 983 aa23■■□□□ 1.27
CGREF1-201ENST00000260595 UTRNP46939 3433 aa22.99■■□□□ 1.27
CGREF1-201ENST00000260595 PHF14O94880 888 aa22.99■■□□□ 1.27
CGREF1-201ENST00000260595 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
CGREF1-201ENST00000260595 GNPATO15228 680 aa22.96■■□□□ 1.27
CGREF1-201ENST00000260595 CABP4P57796 275 aa22.96■■□□□ 1.27
CGREF1-201ENST00000260595 CC2D1BQ5T0F9 858 aaKnown RBP22.96■■□□□ 1.27
CGREF1-201ENST00000260595 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
CGREF1-201ENST00000260595 C1orf141Q5JVX7 400 aa22.95■■□□□ 1.26
CGREF1-201ENST00000260595 CD2APQ9Y5K6 639 aa22.95■■□□□ 1.26
CGREF1-201ENST00000260595 RBM42Q9BTD8 480 aaKnown RBP22.94■■□□□ 1.26
CGREF1-201ENST00000260595 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
CGREF1-201ENST00000260595 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
CGREF1-201ENST00000260595 YBX3P16989 372 aaKnown RBP eCLIP22.92■■□□□ 1.26
CGREF1-201ENST00000260595 NFATC2IPQ8NCF5 419 aa22.92■■□□□ 1.26
CGREF1-201ENST00000260595 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
CGREF1-201ENST00000260595 RC3H1Q5TC82 1133 aaKnown RBP22.91■■□□□ 1.26
CGREF1-201ENST00000260595 HMOX1P09601 288 aa22.9■■□□□ 1.26
CGREF1-201ENST00000260595 AKAP4Q5JQC9 854 aa22.9■■□□□ 1.26
CGREF1-201ENST00000260595 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
CGREF1-201ENST00000260595 CHD4Q14839 1912 aa22.89■■□□□ 1.25
CGREF1-201ENST00000260595 DIAPH1O60610 1272 aaKnown RBP22.89■■□□□ 1.25
CGREF1-201ENST00000260595 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
CGREF1-201ENST00000260595 TRAPPC3LQ5T215 181 aa22.88■■□□□ 1.25
CGREF1-201ENST00000260595 PTCD1O75127 700 aaKnown RBP22.87■■□□□ 1.25
CGREF1-201ENST00000260595 LGR6Q9HBX8 967 aa22.87■■□□□ 1.25
CGREF1-201ENST00000260595 GRIN3BO60391 1043 aa22.86■■□□□ 1.25
CGREF1-201ENST00000260595 RPS6KA4O75676 772 aa22.86■■□□□ 1.25
CGREF1-201ENST00000260595 ARHGEF1Q92888 912 aaKnown RBP22.86■■□□□ 1.25
CGREF1-201ENST00000260595 COL5A3P25940 1745 aaPredicted RBP22.85■■□□□ 1.25
CGREF1-201ENST00000260595 ADRA2BP18089 450 aa22.85■■□□□ 1.25
CGREF1-201ENST00000260595 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
CGREF1-201ENST00000260595 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
CGREF1-201ENST00000260595 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
CGREF1-201ENST00000260595 RNMTO43148 476 aaKnown RBP22.84■■□□□ 1.25
CGREF1-201ENST00000260595 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
CGREF1-201ENST00000260595 GOLGB1Q14789 3259 aaKnown RBP22.83■■□□□ 1.25
CGREF1-201ENST00000260595 MMP10P09238 476 aa22.83■■□□□ 1.25
CGREF1-201ENST00000260595 CNGB1Q14028 1251 aaPredicted RBP22.83■■□□□ 1.25
CGREF1-201ENST00000260595 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
CGREF1-201ENST00000260595 NLGN1Q8N2Q7 840 aa22.82■■□□□ 1.24
CGREF1-201ENST00000260595 MRC1P22897 1456 aa22.81■■□□□ 1.24
CGREF1-201ENST00000260595 GYS1P13807 737 aa22.81■■□□□ 1.24
CGREF1-201ENST00000260595 MYH14Q7Z406 1995 aaKnown RBP22.8■■□□□ 1.24
CGREF1-201ENST00000260595 RFC4P35249 363 aa22.79■■□□□ 1.24
CGREF1-201ENST00000260595 CICQ96RK0 1608 aaPredicted RBP22.79■■□□□ 1.24
CGREF1-201ENST00000260595 ADAMTS7Q9UKP4 1686 aa22.78■■□□□ 1.24
CGREF1-201ENST00000260595 TJP1Q07157 1748 aa22.78■■□□□ 1.24
CGREF1-201ENST00000260595 SLC39A6Q13433 755 aa22.78■■□□□ 1.24
CGREF1-201ENST00000260595 INTS5Q6P9B9 1019 aaKnown RBP22.78■■□□□ 1.24
CGREF1-201ENST00000260595 DNAJC10Q8IXB1 793 aa22.77■■□□□ 1.24
CGREF1-201ENST00000260595 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
CGREF1-201ENST00000260595 WWC3Q9ULE0 1092 aa22.75■■□□□ 1.23
CGREF1-201ENST00000260595 KCPQ6ZWJ8 1503 aa22.74■■□□□ 1.23
CGREF1-201ENST00000260595 SRP68Q9UHB9 627 aaKnown RBP22.74■■□□□ 1.23
CGREF1-201ENST00000260595 PXDNLA1KZ92 1463 aa22.73■■□□□ 1.23
CGREF1-201ENST00000260595 CYP19A1P11511 503 aaPredicted RBP22.73■■□□□ 1.23
CGREF1-201ENST00000260595 TGFB2P61812 414 aa22.73■■□□□ 1.23
CGREF1-201ENST00000260595 CCDC87Q9NVE4 849 aa22.73■■□□□ 1.23
CGREF1-201ENST00000260595 USP42Q9H9J4 1324 aaKnown RBP22.73■■□□□ 1.23
CGREF1-201ENST00000260595 C4AP0C0L4 1744 aa22.73■■□□□ 1.23
CGREF1-201ENST00000260595 C10orf71Q711Q0 1435 aa22.73■■□□□ 1.23
CGREF1-201ENST00000260595 FKBP8Q14318 412 aa22.72■■□□□ 1.23
CGREF1-201ENST00000260595 IL17REQ8NFR9 667 aa22.72■■□□□ 1.23
CGREF1-201ENST00000260595 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
CGREF1-201ENST00000260595 VSIG10Q8N0Z9 540 aa22.71■■□□□ 1.23
CGREF1-201ENST00000260595 GAS2L2Q8NHY3 880 aa22.71■■□□□ 1.23
CGREF1-201ENST00000260595 PARP3Q9Y6F1 533 aa22.71■■□□□ 1.23
CGREF1-201ENST00000260595 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
CGREF1-201ENST00000260595 SOS1Q07889 1333 aaPredicted RBP22.7■■□□□ 1.22
CGREF1-201ENST00000260595 KIAA1551Q9HCM1 1747 aa22.7■■□□□ 1.22
CGREF1-201ENST00000260595 A0A0G2JLW4 131 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 GNAT3A8MTJ3 354 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 C1QTNF8P60827 252 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 CFAP53Q96M91 514 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
CGREF1-201ENST00000260595 DDR1Q08345 913 aa22.68■■□□□ 1.22
CGREF1-201ENST00000260595 ADCY9O60503 1353 aa22.67■■□□□ 1.22
CGREF1-201ENST00000260595 VIRMAQ69YN4 1812 aaKnown RBP22.67■■□□□ 1.22
CGREF1-201ENST00000260595 DPEP1P16444 411 aa22.67■■□□□ 1.22
CGREF1-201ENST00000260595 TM4SF1P30408 202 aa22.67■■□□□ 1.22
CGREF1-201ENST00000260595 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
CGREF1-201ENST00000260595 ZBTB1Q9Y2K1 713 aa22.67■■□□□ 1.22
CGREF1-201ENST00000260595 ATP10DQ9P241 1426 aa22.66■■□□□ 1.22
CGREF1-201ENST00000260595 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
CGREF1-201ENST00000260595 CEMIPQ8WUJ3 1361 aa22.65■■□□□ 1.22
CGREF1-201ENST00000260595 KCNA3P22001 575 aa22.65■■□□□ 1.22
CGREF1-201ENST00000260595 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.22
CGREF1-201ENST00000260595 POLRMTO00411 1230 aaKnown RBP22.64■■□□□ 1.21
CGREF1-201ENST00000260595 ZPR1O75312 459 aa22.64■■□□□ 1.21
CGREF1-201ENST00000260595 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
CGREF1-201ENST00000260595 TEFQ10587 303 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms