RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
CSHL1-201ENST00000259003 EIF4A2Q14240 407 aaKnown RBP17.59■□□□□ 0.41
CSHL1-201ENST00000259003 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
CSHL1-201ENST00000259003 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
CSHL1-201ENST00000259003 SSFA2P28290 1259 aa17.58■□□□□ 0.4
CSHL1-201ENST00000259003 GPBP1L1Q9HC44 474 aaPredicted RBP17.58■□□□□ 0.4
CSHL1-201ENST00000259003 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
CSHL1-201ENST00000259003 CDCA8Q53HL2 280 aa17.57■□□□□ 0.4
CSHL1-201ENST00000259003 MMP10P09238 476 aa17.56■□□□□ 0.4
CSHL1-201ENST00000259003 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
CSHL1-201ENST00000259003 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
CSHL1-201ENST00000259003 KDRP35968 1356 aa17.55■□□□□ 0.4
CSHL1-201ENST00000259003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
CSHL1-201ENST00000259003 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
CSHL1-201ENST00000259003 A0A0G2JLW4 131 aa17.53■□□□□ 0.4
CSHL1-201ENST00000259003 KIF3CO14782 793 aa17.53■□□□□ 0.4
CSHL1-201ENST00000259003 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
CSHL1-201ENST00000259003 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
CSHL1-201ENST00000259003 ARFGEF1Q9Y6D6 1849 aa17.52■□□□□ 0.4
CSHL1-201ENST00000259003 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
CSHL1-201ENST00000259003 TJP1Q07157 1748 aa17.52■□□□□ 0.39
CSHL1-201ENST00000259003 SBF1O95248 1867 aa17.52■□□□□ 0.39
CSHL1-201ENST00000259003 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
CSHL1-201ENST00000259003 HSPA6P17066 643 aa17.51■□□□□ 0.39
CSHL1-201ENST00000259003 IFFO2Q5TF58 517 aa17.51■□□□□ 0.39
CSHL1-201ENST00000259003 AEBP1Q8IUX7 1158 aa17.51■□□□□ 0.39
CSHL1-201ENST00000259003 C10orf71Q711Q0 1435 aa17.49■□□□□ 0.39
CSHL1-201ENST00000259003 GYS1P13807 737 aa17.49■□□□□ 0.39
CSHL1-201ENST00000259003 TRIM26Q12899 539 aaPredicted RBP17.49■□□□□ 0.39
CSHL1-201ENST00000259003 TRAPPC3LQ5T215 181 aa17.49■□□□□ 0.39
CSHL1-201ENST00000259003 BCS1LQ9Y276 419 aa17.49■□□□□ 0.39
CSHL1-201ENST00000259003 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
CSHL1-201ENST00000259003 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
CSHL1-201ENST00000259003 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
CSHL1-201ENST00000259003 DPEP1P16444 411 aa17.48■□□□□ 0.39
CSHL1-201ENST00000259003 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
CSHL1-201ENST00000259003 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
CSHL1-201ENST00000259003 ZNF530Q6P9A1 599 aaPredicted RBP17.47■□□□□ 0.39
CSHL1-201ENST00000259003 PANK3Q9H999 370 aa17.47■□□□□ 0.39
CSHL1-201ENST00000259003 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
CSHL1-201ENST00000259003 ERVV-2B6SEH9 535 aa17.46■□□□□ 0.39
CSHL1-201ENST00000259003 PTCD1O75127 700 aaKnown RBP17.46■□□□□ 0.39
CSHL1-201ENST00000259003 KCNA3P22001 575 aa17.46■□□□□ 0.39
CSHL1-201ENST00000259003 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
CSHL1-201ENST00000259003 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
CSHL1-201ENST00000259003 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
CSHL1-201ENST00000259003 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
CSHL1-201ENST00000259003 RC3H1Q5TC82 1133 aaKnown RBP17.44■□□□□ 0.38
CSHL1-201ENST00000259003 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
CSHL1-201ENST00000259003 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
CSHL1-201ENST00000259003 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
CSHL1-201ENST00000259003 CABP4P57796 275 aa17.43■□□□□ 0.38
CSHL1-201ENST00000259003 TGFB2P61812 414 aa17.43■□□□□ 0.38
CSHL1-201ENST00000259003 DDR1Q08345 913 aa17.43■□□□□ 0.38
CSHL1-201ENST00000259003 NLGN1Q8N2Q7 840 aa17.43■□□□□ 0.38
CSHL1-201ENST00000259003 NFATC2IPQ8NCF5 419 aa17.43■□□□□ 0.38
CSHL1-201ENST00000259003 FCHSD2O94868 740 aa17.42■□□□□ 0.38
CSHL1-201ENST00000259003 RFC4P35249 363 aa17.42■□□□□ 0.38
CSHL1-201ENST00000259003 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
CSHL1-201ENST00000259003 FKBP8Q14318 412 aa17.42■□□□□ 0.38
CSHL1-201ENST00000259003 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
CSHL1-201ENST00000259003 MTHFSP49914 203 aa17.41■□□□□ 0.38
CSHL1-201ENST00000259003 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
CSHL1-201ENST00000259003 CCDC87Q9NVE4 849 aa17.41■□□□□ 0.38
CSHL1-201ENST00000259003 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
CSHL1-201ENST00000259003 ADRA2BP18089 450 aa17.4■□□□□ 0.38
CSHL1-201ENST00000259003 WDR90Q96KV7 1748 aa17.4■□□□□ 0.38
CSHL1-201ENST00000259003 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
CSHL1-201ENST00000259003 CHRNA5P30532 468 aa17.39■□□□□ 0.37
CSHL1-201ENST00000259003 HTRA3P83110 453 aa17.39■□□□□ 0.37
CSHL1-201ENST00000259003 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
CSHL1-201ENST00000259003 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
CSHL1-201ENST00000259003 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
CSHL1-201ENST00000259003 LGR6Q9HBX8 967 aa17.38■□□□□ 0.37
CSHL1-201ENST00000259003 KCPQ6ZWJ8 1503 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 IL13P35225 146 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 AMOTQ4VCS5 1084 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 DNAJC10Q8IXB1 793 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 DNAJC5GQ8N7S2 189 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 USP42Q9H9J4 1324 aaKnown RBP17.37■□□□□ 0.37
CSHL1-201ENST00000259003 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
CSHL1-201ENST00000259003 SLC39A6Q13433 755 aa17.36■□□□□ 0.37
CSHL1-201ENST00000259003 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
CSHL1-201ENST00000259003 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
CSHL1-201ENST00000259003 POLRMTO00411 1230 aaKnown RBP17.35■□□□□ 0.37
CSHL1-201ENST00000259003 TOMM70O94826 608 aa17.35■□□□□ 0.37
CSHL1-201ENST00000259003 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
CSHL1-201ENST00000259003 NRXN2Q9P2S2 1712 aa17.35■□□□□ 0.37
CSHL1-201ENST00000259003 DLEC1Q9Y238 1755 aa17.35■□□□□ 0.37
CSHL1-201ENST00000259003 USPL1Q5W0Q7 1092 aa17.34■□□□□ 0.37
CSHL1-201ENST00000259003 ANKRD31Q8N7Z5 1873 aa17.34■□□□□ 0.37
CSHL1-201ENST00000259003 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
CSHL1-201ENST00000259003 PCNTO95613 3336 aa17.33■□□□□ 0.37
CSHL1-201ENST00000259003 HMOX1P09601 288 aa17.33■□□□□ 0.36
CSHL1-201ENST00000259003 TM4SF1P30408 202 aa17.33■□□□□ 0.36
CSHL1-201ENST00000259003 PIM2Q9P1W9 311 aa17.33■□□□□ 0.36
CSHL1-201ENST00000259003 UBR2Q8IWV8 1755 aa17.33■□□□□ 0.36
CSHL1-201ENST00000259003 APLP1P51693 650 aa17.32■□□□□ 0.36
CSHL1-201ENST00000259003 PRELPP51888 382 aa17.32■□□□□ 0.36
CSHL1-201ENST00000259003 RASSF7Q02833 373 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms