RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 ATG3Q9NT62 314 aa25.42■■□□□ 1.66
KHDC1-201ENST00000257765 KDRP35968 1356 aa25.42■■□□□ 1.66
KHDC1-201ENST00000257765 COL5A3P25940 1745 aaPredicted RBP25.41■■□□□ 1.66
KHDC1-201ENST00000257765 PCGF6Q9BYE7 350 aa25.41■■□□□ 1.66
KHDC1-201ENST00000257765 EIF4G2P78344 907 aaKnown RBP eCLIP25.4■■□□□ 1.66
KHDC1-201ENST00000257765 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.65
KHDC1-201ENST00000257765 HSP90AB1P08238 724 aaKnown RBP25.38■■□□□ 1.65
KHDC1-201ENST00000257765 ADCY9O60503 1353 aa25.38■■□□□ 1.65
KHDC1-201ENST00000257765 ERVV-2B6SEH9 535 aa25.37■■□□□ 1.65
KHDC1-201ENST00000257765 PANK3Q9H999 370 aa25.37■■□□□ 1.65
KHDC1-201ENST00000257765 HSPA5P11021 654 aaKnown RBP25.36■■□□□ 1.65
KHDC1-201ENST00000257765 DCAF5Q96JK2 942 aa25.36■■□□□ 1.65
KHDC1-201ENST00000257765 WWC3Q9ULE0 1092 aa25.36■■□□□ 1.65
KHDC1-201ENST00000257765 PLEKHO1Q53GL0 409 aaPredicted RBP25.35■■□□□ 1.65
KHDC1-201ENST00000257765 KDM6AO15550 1401 aaPredicted RBP25.35■■□□□ 1.65
KHDC1-201ENST00000257765 KIAA1551Q9HCM1 1747 aa25.34■■□□□ 1.65
KHDC1-201ENST00000257765 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
KHDC1-201ENST00000257765 RBM42Q9BTD8 480 aaKnown RBP25.34■■□□□ 1.65
KHDC1-201ENST00000257765 GPBP1L1Q9HC44 474 aaPredicted RBP25.34■■□□□ 1.65
KHDC1-201ENST00000257765 RTCBQ9Y3I0 505 aaKnown RBP25.34■■□□□ 1.65
KHDC1-201ENST00000257765 MMP10P09238 476 aa25.33■■□□□ 1.65
KHDC1-201ENST00000257765 C4AP0C0L4 1744 aa25.33■■□□□ 1.65
KHDC1-201ENST00000257765 ZNF530Q6P9A1 599 aaPredicted RBP25.33■■□□□ 1.65
KHDC1-201ENST00000257765 N4BP2Q86UW6 1770 aaPredicted RBP25.32■■□□□ 1.64
KHDC1-201ENST00000257765 AMOTQ4VCS5 1084 aa25.32■■□□□ 1.64
KHDC1-201ENST00000257765 TRAPPC3LQ5T215 181 aa25.32■■□□□ 1.64
KHDC1-201ENST00000257765 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
KHDC1-201ENST00000257765 PXDNLA1KZ92 1463 aa25.31■■□□□ 1.64
KHDC1-201ENST00000257765 CNTNAP4Q9C0A0 1308 aa25.31■■□□□ 1.64
KHDC1-201ENST00000257765 MYH14Q7Z406 1995 aaKnown RBP25.31■■□□□ 1.64
KHDC1-201ENST00000257765 ADRA2BP18089 450 aa25.3■■□□□ 1.64
KHDC1-201ENST00000257765 CABP4P57796 275 aa25.3■■□□□ 1.64
KHDC1-201ENST00000257765 RC3H1Q5TC82 1133 aaKnown RBP25.3■■□□□ 1.64
KHDC1-201ENST00000257765 MORC1Q86VD1 984 aa25.3■■□□□ 1.64
KHDC1-201ENST00000257765 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
KHDC1-201ENST00000257765 C1orf141Q5JVX7 400 aa25.28■■□□□ 1.64
KHDC1-201ENST00000257765 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
KHDC1-201ENST00000257765 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
KHDC1-201ENST00000257765 ZNF526Q8TF50 670 aaPredicted RBP25.28■■□□□ 1.64
KHDC1-201ENST00000257765 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
KHDC1-201ENST00000257765 TJP1Q07157 1748 aa25.26■■□□□ 1.63
KHDC1-201ENST00000257765 MTHFSP49914 203 aa25.26■■□□□ 1.63
KHDC1-201ENST00000257765 ARHGEF1Q92888 912 aaKnown RBP25.26■■□□□ 1.63
KHDC1-201ENST00000257765 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
KHDC1-201ENST00000257765 RPS6KA4O75676 772 aa25.25■■□□□ 1.63
KHDC1-201ENST00000257765 RFC4P35249 363 aa25.24■■□□□ 1.63
KHDC1-201ENST00000257765 TGFB2P61812 414 aa25.24■■□□□ 1.63
KHDC1-201ENST00000257765 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
KHDC1-201ENST00000257765 GYS1P13807 737 aa25.23■■□□□ 1.63
KHDC1-201ENST00000257765 CCDC87Q9NVE4 849 aa25.23■■□□□ 1.63
KHDC1-201ENST00000257765 KNSTRNQ9Y448 316 aa25.23■■□□□ 1.63
KHDC1-201ENST00000257765 VIRMAQ69YN4 1812 aaKnown RBP25.22■■□□□ 1.63
KHDC1-201ENST00000257765 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
KHDC1-201ENST00000257765 NFATC2IPQ8NCF5 419 aa25.2■■□□□ 1.62
KHDC1-201ENST00000257765 BCS1LQ9Y276 419 aa25.2■■□□□ 1.62
KHDC1-201ENST00000257765 PARP3Q9Y6F1 533 aa25.2■■□□□ 1.62
KHDC1-201ENST00000257765 A0A0G2JLW4 131 aa25.19■■□□□ 1.62
KHDC1-201ENST00000257765 IL13P35225 146 aa25.19■■□□□ 1.62
KHDC1-201ENST00000257765 CRKLP46109 303 aaKnown RBP25.19■■□□□ 1.62
KHDC1-201ENST00000257765 ARFGEF1Q9Y6D6 1849 aa25.19■■□□□ 1.62
KHDC1-201ENST00000257765 CCER1Q8TC90 406 aaPredicted RBP25.17■■□□□ 1.62
KHDC1-201ENST00000257765 CEP350Q5VT06 3117 aa25.17■■□□□ 1.62
KHDC1-201ENST00000257765 DPEP1P16444 411 aa25.16■■□□□ 1.62
KHDC1-201ENST00000257765 HSPA6P17066 643 aa25.16■■□□□ 1.62
KHDC1-201ENST00000257765 ADAMTS7Q9UKP4 1686 aa25.16■■□□□ 1.62
KHDC1-201ENST00000257765 AKAP4Q5JQC9 854 aa25.15■■□□□ 1.62
KHDC1-201ENST00000257765 AMER1Q5JTC6 1135 aaPredicted RBP25.15■■□□□ 1.62
KHDC1-201ENST00000257765 MRC1P22897 1456 aa25.15■■□□□ 1.62
KHDC1-201ENST00000257765 USP42Q9H9J4 1324 aaKnown RBP25.14■■□□□ 1.62
KHDC1-201ENST00000257765 KIF3CO14782 793 aa25.14■■□□□ 1.62
KHDC1-201ENST00000257765 SRP68Q9UHB9 627 aaKnown RBP25.14■■□□□ 1.62
KHDC1-201ENST00000257765 FCHSD2O94868 740 aa25.13■■□□□ 1.61
KHDC1-201ENST00000257765 ARHGAP27Q6ZUM4 889 aa25.12■■□□□ 1.61
KHDC1-201ENST00000257765 FKBP8Q14318 412 aa25.11■■□□□ 1.61
KHDC1-201ENST00000257765 SLC52A2Q9HAB3 445 aa25.11■■□□□ 1.61
KHDC1-201ENST00000257765 INTS5Q6P9B9 1019 aaKnown RBP25.1■■□□□ 1.61
KHDC1-201ENST00000257765 KIF7Q2M1P5 1343 aa25.1■■□□□ 1.61
KHDC1-201ENST00000257765 DDR1Q08345 913 aa25.09■■□□□ 1.61
KHDC1-201ENST00000257765 KCPQ6ZWJ8 1503 aa25.08■■□□□ 1.61
KHDC1-201ENST00000257765 KCNA3P22001 575 aa25.08■■□□□ 1.61
KHDC1-201ENST00000257765 DNAJC10Q8IXB1 793 aa25.08■■□□□ 1.61
KHDC1-201ENST00000257765 HMOX1P09601 288 aa25.07■■□□□ 1.6
KHDC1-201ENST00000257765 LGR6Q9HBX8 967 aa25.07■■□□□ 1.6
KHDC1-201ENST00000257765 PIM2Q9P1W9 311 aa25.07■■□□□ 1.6
KHDC1-201ENST00000257765 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
KHDC1-201ENST00000257765 RNMTO43148 476 aaKnown RBP25.06■■□□□ 1.6
KHDC1-201ENST00000257765 AFDNP55196 1824 aaKnown RBP25.06■■□□□ 1.6
KHDC1-201ENST00000257765 SOS1Q07889 1333 aaPredicted RBP25.06■■□□□ 1.6
KHDC1-201ENST00000257765 ZPR1O75312 459 aa25.05■■□□□ 1.6
KHDC1-201ENST00000257765 POLRMTO00411 1230 aaKnown RBP25.04■■□□□ 1.6
KHDC1-201ENST00000257765 SLC39A6Q13433 755 aa25.04■■□□□ 1.6
KHDC1-201ENST00000257765 DALRD3Q5D0E6 543 aaKnown RBP25.04■■□□□ 1.6
KHDC1-201ENST00000257765 USPL1Q5W0Q7 1092 aa25.03■■□□□ 1.6
KHDC1-201ENST00000257765 COL15A1P39059 1388 aa25.03■■□□□ 1.6
KHDC1-201ENST00000257765 NRXN2Q9P2S2 1712 aa25.03■■□□□ 1.6
KHDC1-201ENST00000257765 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
KHDC1-201ENST00000257765 TOMM70O94826 608 aa25.02■■□□□ 1.6
KHDC1-201ENST00000257765 CYP19A1P11511 503 aaPredicted RBP25.02■■□□□ 1.6
KHDC1-201ENST00000257765 TM4SF1P30408 202 aa25.02■■□□□ 1.6
KHDC1-201ENST00000257765 MTHFSDQ2M296 383 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms