RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 PI4KAP2A4QPH2 592 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 PI4KAP1Q8N8J0 262 aa18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 RRAGDQ9NQL2 400 aaPredicted RBP18.14■□□□□ 0.49
TRAFD1-201ENST00000257604 MAP4K4O95819 1239 aaPredicted RBP18.13■□□□□ 0.49
TRAFD1-201ENST00000257604 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
TRAFD1-201ENST00000257604 ADGRL3Q9HAR2 1447 aa18.13■□□□□ 0.49
TRAFD1-201ENST00000257604 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
TRAFD1-201ENST00000257604 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 PNMA6EA0A0J9YXQ4 647 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 TBC1D9Q6ZT07 1266 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 GNAI2P04899 355 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
TRAFD1-201ENST00000257604 PTPRCP08575 1304 aa18.11■□□□□ 0.49
TRAFD1-201ENST00000257604 KDRP35968 1356 aa18.11■□□□□ 0.49
TRAFD1-201ENST00000257604 UBTFL1P0CB47 393 aaPredicted RBP18.11■□□□□ 0.49
TRAFD1-201ENST00000257604 OS9Q13438 667 aaPredicted RBP18.11■□□□□ 0.49
TRAFD1-201ENST00000257604 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
TRAFD1-201ENST00000257604 NFATC2IPQ8NCF5 419 aa18.1■□□□□ 0.49
TRAFD1-201ENST00000257604 HMMRO75330 724 aa18.1■□□□□ 0.49
TRAFD1-201ENST00000257604 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
TRAFD1-201ENST00000257604 PLEKHM2Q8IWE5 1019 aa18.1■□□□□ 0.49
TRAFD1-201ENST00000257604 DCTPP1Q9H773 170 aa18.09■□□□□ 0.49
TRAFD1-201ENST00000257604 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
TRAFD1-201ENST00000257604 GSPT1P15170 499 aaKnown RBP18.09■□□□□ 0.49
TRAFD1-201ENST00000257604 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
TRAFD1-201ENST00000257604 NOL8Q76FK4 1167 aaKnown RBP18.08■□□□□ 0.49
TRAFD1-201ENST00000257604 FAM43AQ8N2R8 423 aa18.08■□□□□ 0.49
TRAFD1-201ENST00000257604 SURF6O75683 361 aaKnown RBP18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 NUTM1Q86Y26 1132 aa18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 RPAP2Q8IXW5 612 aaPredicted RBP18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 NAP1L5Q96NT1 182 aaPredicted RBP18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 KIAA0232Q92628 1395 aa18.08■□□□□ 0.48
TRAFD1-201ENST00000257604 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 CWF19L2Q2TBE0 894 aaKnown RBP18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 AKAP4Q5JQC9 854 aa18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 HSCBQ8IWL3 235 aa18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 KAT6BQ8WYB5 2073 aa18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 HSP90AB1P08238 724 aaKnown RBP18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 TOPAZ1Q8N9V7 1692 aa18.07■□□□□ 0.48
TRAFD1-201ENST00000257604 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
TRAFD1-201ENST00000257604 TOM1L2Q6ZVM7 507 aa18.06■□□□□ 0.48
TRAFD1-201ENST00000257604 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
TRAFD1-201ENST00000257604 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
TRAFD1-201ENST00000257604 SRGAP3O43295 1099 aa18.05■□□□□ 0.48
TRAFD1-201ENST00000257604 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
TRAFD1-201ENST00000257604 TATP17735 454 aaPredicted RBP18.05■□□□□ 0.48
TRAFD1-201ENST00000257604 NALCNQ8IZF0 1738 aa18.05■□□□□ 0.48
TRAFD1-201ENST00000257604 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 SDSP20132 328 aa18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 ANTXR1Q9H6X2 564 aa18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 MAP3K2Q9Y2U5 619 aa18.04■□□□□ 0.48
TRAFD1-201ENST00000257604 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 GNAI3P08754 354 aa18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 CDC45O75419 566 aa18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 SIL1Q9H173 461 aa18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 RGS12O14924 1447 aa18.03■□□□□ 0.48
TRAFD1-201ENST00000257604 ERBB3P21860 1342 aa18.02■□□□□ 0.48
TRAFD1-201ENST00000257604 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.48
TRAFD1-201ENST00000257604 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.48
TRAFD1-201ENST00000257604 DNAAF4Q8WXU2 420 aa18.02■□□□□ 0.48
TRAFD1-201ENST00000257604 EVA1CP58658 441 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 RIC3Q7Z5B4 369 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 PODXL2Q9NZ53 605 aa18.01■□□□□ 0.47
TRAFD1-201ENST00000257604 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
TRAFD1-201ENST00000257604 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
TRAFD1-201ENST00000257604 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
TRAFD1-201ENST00000257604 FMN2Q9NZ56 1722 aa17.99■□□□□ 0.47
TRAFD1-201ENST00000257604 PXDNQ92626 1479 aa17.99■□□□□ 0.47
TRAFD1-201ENST00000257604 FOXD4L5Q5VV16 416 aaPredicted RBP17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 FOXD4L4Q8WXT5 416 aaPredicted RBP17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 ATP5J2-PTCD1G3V325 749 aa17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 KLHDC4Q8TBB5 520 aa17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 CHMP3Q9Y3E7 222 aa17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 CHD2O14647 1828 aaKnown RBP17.98■□□□□ 0.47
TRAFD1-201ENST00000257604 CABP4P57796 275 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 ZNF496Q96IT1 587 aaPredicted RBP17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 DBF4Q9UBU7 674 aaPredicted RBP17.97■□□□□ 0.47
TRAFD1-201ENST00000257604 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms