RNA–Protein interactions for RNA: ENST00000254730.10

EEFSEC-201, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEFSEC, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-201ENST00000254730 MSH5O43196 834 aa27.39■■□□□ 1.97
EEFSEC-201ENST00000254730 STK31Q9BXU1 1019 aa27.39■■□□□ 1.97
EEFSEC-201ENST00000254730 EIF4A1P60842 406 aaKnown RBP27.38■■□□□ 1.97
EEFSEC-201ENST00000254730 SMC5Q8IY18 1101 aa27.38■■□□□ 1.97
EEFSEC-201ENST00000254730 PKD1L3Q7Z443 1732 aa27.37■■□□□ 1.97
EEFSEC-201ENST00000254730 BTBD11A6QL63 1104 aa27.36■■□□□ 1.97
EEFSEC-201ENST00000254730 TATP17735 454 aaPredicted RBP27.36■■□□□ 1.97
EEFSEC-201ENST00000254730 F6X3S4 739 aa27.35■■□□□ 1.97
EEFSEC-201ENST00000254730 PRDM11Q9NQV5 511 aa27.35■■□□□ 1.97
EEFSEC-201ENST00000254730 SIRT2Q8IXJ6 389 aa27.34■■□□□ 1.97
EEFSEC-201ENST00000254730 N4BP2Q86UW6 1770 aaPredicted RBP27.34■■□□□ 1.97
EEFSEC-201ENST00000254730 HDGFL1Q5TGJ6 251 aa27.33■■□□□ 1.97
EEFSEC-201ENST00000254730 FLIIQ13045 1269 aa27.32■■□□□ 1.96
EEFSEC-201ENST00000254730 NPM2Q86SE8 214 aaKnown RBP27.32■■□□□ 1.96
EEFSEC-201ENST00000254730 KDM6AO15550 1401 aaPredicted RBP27.32■■□□□ 1.96
EEFSEC-201ENST00000254730 ANP32AP39687 249 aaKnown RBP27.32■■□□□ 1.96
EEFSEC-201ENST00000254730 SPG7Q9UQ90 795 aa27.3■■□□□ 1.96
EEFSEC-201ENST00000254730 PHKG2P15735 406 aa27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 SLC4A10Q6U841 1118 aa27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 COL5A2P05997 1499 aaPredicted RBP27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 PARP4Q9UKK3 1724 aaKnown RBP27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 ROBO1Q9Y6N7 1651 aa27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.29■■□□□ 1.96
EEFSEC-201ENST00000254730 HOXB7P09629 217 aa27.28■■□□□ 1.96
EEFSEC-201ENST00000254730 FKBP5Q13451 457 aaPredicted RBP27.28■■□□□ 1.96
EEFSEC-201ENST00000254730 MEIS3Q99687 375 aa27.28■■□□□ 1.96
EEFSEC-201ENST00000254730 ATP10DQ9P241 1426 aa27.28■■□□□ 1.96
EEFSEC-201ENST00000254730 EIF2S2P20042 333 aaKnown RBP27.28■■□□□ 1.96
EEFSEC-201ENST00000254730 WDR17Q8IZU2 1322 aa27.27■■□□□ 1.96
EEFSEC-201ENST00000254730 NUCB1Q02818 461 aa27.27■■□□□ 1.96
EEFSEC-201ENST00000254730 PLEKHG2Q9H7P9 1386 aa27.27■■□□□ 1.96
EEFSEC-201ENST00000254730 CCT4P50991 539 aaKnown RBP27.26■■□□□ 1.95
EEFSEC-201ENST00000254730 PHAXQ9H814 394 aaKnown RBP27.25■■□□□ 1.95
EEFSEC-201ENST00000254730 HEG1Q9ULI3 1381 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 GCC1Q96CN9 775 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 LTBP4Q8N2S1 1624 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 CYP27B1O15528 508 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 CHPF2Q9P2E5 772 aa27.24■■□□□ 1.95
EEFSEC-201ENST00000254730 TOM1L2Q6ZVM7 507 aa27.23■■□□□ 1.95
EEFSEC-201ENST00000254730 C5P01031 1676 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 CHD1LQ86WJ1 897 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 ANKRD44Q8N8A2 993 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 LNPKQ9C0E8 428 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 SLC52A2Q9HAB3 445 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 PXDNLA1KZ92 1463 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 MRC1P22897 1456 aa27.22■■□□□ 1.95
EEFSEC-201ENST00000254730 CEP85Q6P2H3 762 aa27.21■■□□□ 1.95
EEFSEC-201ENST00000254730 GIGYF1O75420 1035 aaPredicted RBP27.21■■□□□ 1.95
EEFSEC-201ENST00000254730 IPO9Q96P70 1041 aaKnown RBP27.21■■□□□ 1.95
EEFSEC-201ENST00000254730 PRAMEF22A3QJZ6 481 aa27.2■■□□□ 1.94
EEFSEC-201ENST00000254730 SHANK3Q9BYB0 1731 aa27.19■■□□□ 1.94
EEFSEC-201ENST00000254730 ANKRD45Q5TZF3 282 aa27.19■■□□□ 1.94
EEFSEC-201ENST00000254730 AHDC1Q5TGY3 1603 aaPredicted RBP27.19■■□□□ 1.94
EEFSEC-201ENST00000254730 ANXA1P04083 346 aa27.18■■□□□ 1.94
EEFSEC-201ENST00000254730 SLC39A6Q13433 755 aa27.18■■□□□ 1.94
EEFSEC-201ENST00000254730 RPAP2Q8IXW5 612 aaPredicted RBP27.18■■□□□ 1.94
EEFSEC-201ENST00000254730 NFATC2IPQ8NCF5 419 aa27.18■■□□□ 1.94
EEFSEC-201ENST00000254730 STRN4Q9NRL3 753 aa27.17■■□□□ 1.94
EEFSEC-201ENST00000254730 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
EEFSEC-201ENST00000254730 LARP1Q6PKG0 1096 aaKnown RBP27.16■■□□□ 1.94
EEFSEC-201ENST00000254730 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
EEFSEC-201ENST00000254730 CHMP4AQ9BY43 222 aa27.16■■□□□ 1.94
EEFSEC-201ENST00000254730 DCTPP1Q9H773 170 aa27.16■■□□□ 1.94
EEFSEC-201ENST00000254730 SEC24BO95487 1268 aa27.15■■□□□ 1.94
EEFSEC-201ENST00000254730 CARD10Q9BWT7 1032 aa27.15■■□□□ 1.94
EEFSEC-201ENST00000254730 COL22A1Q8NFW1 1626 aaPredicted RBP27.14■■□□□ 1.93
EEFSEC-201ENST00000254730 PROSER3Q2NL68 480 aa27.13■■□□□ 1.93
EEFSEC-201ENST00000254730 HSP90AB1P08238 724 aaKnown RBP27.13■■□□□ 1.93
EEFSEC-201ENST00000254730 DBF4Q9UBU7 674 aaPredicted RBP27.13■■□□□ 1.93
EEFSEC-201ENST00000254730 EVA1CP58658 441 aa27.12■■□□□ 1.93
EEFSEC-201ENST00000254730 ZCRB1Q8TBF4 217 aaKnown RBP27.12■■□□□ 1.93
EEFSEC-201ENST00000254730 COL14A1Q05707 1796 aaKnown RBP27.11■■□□□ 1.93
EEFSEC-201ENST00000254730 PCDH11XQ9BZA7 1347 aa27.11■■□□□ 1.93
EEFSEC-201ENST00000254730 PCDH11YQ9BZA8 1340 aa27.11■■□□□ 1.93
EEFSEC-201ENST00000254730 COL16A1Q07092 1604 aaPredicted RBP27.11■■□□□ 1.93
EEFSEC-201ENST00000254730 ADCY9O60503 1353 aa27.1■■□□□ 1.93
EEFSEC-201ENST00000254730 GNAI2P04899 355 aa27.1■■□□□ 1.93
EEFSEC-201ENST00000254730 IL2RBP14784 551 aa27.1■■□□□ 1.93
EEFSEC-201ENST00000254730 GNAI3P08754 354 aa27.09■■□□□ 1.93
EEFSEC-201ENST00000254730 PI4KAP2A4QPH2 592 aa27.09■■□□□ 1.93
EEFSEC-201ENST00000254730 PI4KAP1Q8N8J0 262 aa27.09■■□□□ 1.93
EEFSEC-201ENST00000254730 USP44Q9H0E7 712 aa27.09■■□□□ 1.93
EEFSEC-201ENST00000254730 GLI3P10071 1580 aa27.08■■□□□ 1.93
EEFSEC-201ENST00000254730 CABP4P57796 275 aa27.08■■□□□ 1.93
EEFSEC-201ENST00000254730 DNAAF4Q8WXU2 420 aa27.08■■□□□ 1.93
EEFSEC-201ENST00000254730 NOP58Q9Y2X3 529 aaKnown RBP27.08■■□□□ 1.93
EEFSEC-201ENST00000254730 ZNF496Q96IT1 587 aaPredicted RBP27.08■■□□□ 1.92
EEFSEC-201ENST00000254730 PHLPP1O60346 1717 aa27.07■■□□□ 1.92
EEFSEC-201ENST00000254730 SRCIN1Q9C0H9 1055 aa27.06■■□□□ 1.92
EEFSEC-201ENST00000254730 BTG4Q9NY30 223 aa27.06■■□□□ 1.92
EEFSEC-201ENST00000254730 BEND3Q5T5X7 828 aa27.05■■□□□ 1.92
EEFSEC-201ENST00000254730 PDIA6Q15084 440 aa27.05■■□□□ 1.92
EEFSEC-201ENST00000254730 LRRFIP2Q9Y608 721 aaKnown RBP27.05■■□□□ 1.92
EEFSEC-201ENST00000254730 LAMB4A4D0S4 1761 aa27.04■■□□□ 1.92
EEFSEC-201ENST00000254730 HMMRO75330 724 aa27.04■■□□□ 1.92
EEFSEC-201ENST00000254730 TTC5Q8N0Z6 440 aa27.04■■□□□ 1.92
EEFSEC-201ENST00000254730 DDX21Q9NR30 783 aaKnown RBP eCLIP27.04■■□□□ 1.92
EEFSEC-201ENST00000254730 HYPKQ9NX55 129 aa27.04■■□□□ 1.92
EEFSEC-201ENST00000254730 USP35Q9P2H5 1018 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms