RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 KCNA4P22459 653 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 SSFA2P28290 1259 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 MORC1Q86VD1 984 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 CD2APQ9Y5K6 639 aa17.66■□□□□ 0.42
APOBEC3A-201ENST00000249116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.65■□□□□ 0.42
APOBEC3A-201ENST00000249116 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
APOBEC3A-201ENST00000249116 PLEKHO1Q53GL0 409 aaPredicted RBP17.65■□□□□ 0.42
APOBEC3A-201ENST00000249116 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
APOBEC3A-201ENST00000249116 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
APOBEC3A-201ENST00000249116 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.42
APOBEC3A-201ENST00000249116 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
APOBEC3A-201ENST00000249116 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
APOBEC3A-201ENST00000249116 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
APOBEC3A-201ENST00000249116 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
APOBEC3A-201ENST00000249116 GNPATO15228 680 aa17.62■□□□□ 0.41
APOBEC3A-201ENST00000249116 YBX3P16989 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
APOBEC3A-201ENST00000249116 ITPK1Q13572 414 aa17.62■□□□□ 0.41
APOBEC3A-201ENST00000249116 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
APOBEC3A-201ENST00000249116 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
APOBEC3A-201ENST00000249116 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
APOBEC3A-201ENST00000249116 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
APOBEC3A-201ENST00000249116 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
APOBEC3A-201ENST00000249116 CABP4P57796 275 aa17.59■□□□□ 0.41
APOBEC3A-201ENST00000249116 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
APOBEC3A-201ENST00000249116 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.41
APOBEC3A-201ENST00000249116 KDRP35968 1356 aa17.58■□□□□ 0.4
APOBEC3A-201ENST00000249116 MTHFSP49914 203 aa17.57■□□□□ 0.4
APOBEC3A-201ENST00000249116 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
APOBEC3A-201ENST00000249116 C1QTNF8P60827 252 aa17.56■□□□□ 0.4
APOBEC3A-201ENST00000249116 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
APOBEC3A-201ENST00000249116 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
APOBEC3A-201ENST00000249116 KDM6AO15550 1401 aaPredicted RBP17.56■□□□□ 0.4
APOBEC3A-201ENST00000249116 GIGYF1O75420 1035 aaPredicted RBP17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 IL13P35225 146 aa17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 AMER1Q5JTC6 1135 aaPredicted RBP17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 SLC4A9Q96Q91 983 aa17.55■□□□□ 0.4
APOBEC3A-201ENST00000249116 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
APOBEC3A-201ENST00000249116 ZNF831Q5JPB2 1677 aa17.54■□□□□ 0.4
APOBEC3A-201ENST00000249116 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
APOBEC3A-201ENST00000249116 MMP10P09238 476 aa17.53■□□□□ 0.4
APOBEC3A-201ENST00000249116 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
APOBEC3A-201ENST00000249116 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
APOBEC3A-201ENST00000249116 RFC4P35249 363 aa17.52■□□□□ 0.4
APOBEC3A-201ENST00000249116 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
APOBEC3A-201ENST00000249116 PTCD1O75127 700 aaKnown RBP17.51■□□□□ 0.39
APOBEC3A-201ENST00000249116 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
APOBEC3A-201ENST00000249116 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
APOBEC3A-201ENST00000249116 UTRNP46939 3433 aa17.49■□□□□ 0.39
APOBEC3A-201ENST00000249116 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
APOBEC3A-201ENST00000249116 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
APOBEC3A-201ENST00000249116 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
APOBEC3A-201ENST00000249116 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
APOBEC3A-201ENST00000249116 GYS1P13807 737 aa17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 TGFB2P61812 414 aa17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 PARP3Q9Y6F1 533 aa17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 PER1O15534 1290 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 DIAPH1O60610 1272 aaKnown RBP17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
APOBEC3A-201ENST00000249116 CICQ96RK0 1608 aaPredicted RBP17.46■□□□□ 0.39
APOBEC3A-201ENST00000249116 HMOX1P09601 288 aa17.46■□□□□ 0.39
APOBEC3A-201ENST00000249116 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.39
APOBEC3A-201ENST00000249116 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
APOBEC3A-201ENST00000249116 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
APOBEC3A-201ENST00000249116 C10orf71Q711Q0 1435 aa17.44■□□□□ 0.38
APOBEC3A-201ENST00000249116 ADCY9O60503 1353 aa17.44■□□□□ 0.38
APOBEC3A-201ENST00000249116 RNMTO43148 476 aaKnown RBP17.44■□□□□ 0.38
APOBEC3A-201ENST00000249116 LGR6Q9HBX8 967 aa17.44■□□□□ 0.38
APOBEC3A-201ENST00000249116 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
APOBEC3A-201ENST00000249116 A0A0G2JLW4 131 aa17.42■□□□□ 0.38
APOBEC3A-201ENST00000249116 BCS1LQ9Y276 419 aa17.42■□□□□ 0.38
APOBEC3A-201ENST00000249116 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
APOBEC3A-201ENST00000249116 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
APOBEC3A-201ENST00000249116 KIF13BQ9NQT8 1826 aa17.42■□□□□ 0.38
APOBEC3A-201ENST00000249116 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 ZNF526Q8TF50 670 aaPredicted RBP17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 SRP68Q9UHB9 627 aaKnown RBP17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 TJP1Q07157 1748 aa17.41■□□□□ 0.38
APOBEC3A-201ENST00000249116 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
APOBEC3A-201ENST00000249116 MRC1P22897 1456 aa17.4■□□□□ 0.38
APOBEC3A-201ENST00000249116 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
APOBEC3A-201ENST00000249116 ZPR1O75312 459 aa17.39■□□□□ 0.38
APOBEC3A-201ENST00000249116 DPEP1P16444 411 aa17.39■□□□□ 0.38
APOBEC3A-201ENST00000249116 SLC39A6Q13433 755 aa17.39■□□□□ 0.38
APOBEC3A-201ENST00000249116 FCHSD2O94868 740 aa17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 FKBP8Q14318 412 aa17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 KIAA1551Q9HCM1 1747 aa17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 CYP19A1P11511 503 aaPredicted RBP17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 VSIG10Q8N0Z9 540 aa17.38■□□□□ 0.37
APOBEC3A-201ENST00000249116 N4BP2Q86UW6 1770 aaPredicted RBP17.37■□□□□ 0.37
APOBEC3A-201ENST00000249116 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
APOBEC3A-201ENST00000249116 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
APOBEC3A-201ENST00000249116 PIM2Q9P1W9 311 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms