RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
SDF2-201ENST00000247020 MIS18AQ9NYP9 233 aa18.11■□□□□ 0.49
SDF2-201ENST00000247020 DDX19BQ9UMR2 479 aa18.11■□□□□ 0.49
SDF2-201ENST00000247020 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
SDF2-201ENST00000247020 PTPRCP08575 1304 aa18.1■□□□□ 0.49
SDF2-201ENST00000247020 IL2RBP14784 551 aa18.1■□□□□ 0.49
SDF2-201ENST00000247020 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
SDF2-201ENST00000247020 BTG4Q9NY30 223 aa18.09■□□□□ 0.49
SDF2-201ENST00000247020 BTBD11A6QL63 1104 aa18.08■□□□□ 0.49
SDF2-201ENST00000247020 PIP4K2BP78356 416 aa18.08■□□□□ 0.49
SDF2-201ENST00000247020 KRT24Q2M2I5 525 aa18.08■□□□□ 0.49
SDF2-201ENST00000247020 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.49
SDF2-201ENST00000247020 N4BP2Q86UW6 1770 aaPredicted RBP18.08■□□□□ 0.49
SDF2-201ENST00000247020 ABCC4O15439 1325 aa18.08■□□□□ 0.48
SDF2-201ENST00000247020 EIF4A1P60842 406 aaKnown RBP18.08■□□□□ 0.48
SDF2-201ENST00000247020 CCDC30Q5VVM6 783 aa18.08■□□□□ 0.48
SDF2-201ENST00000247020 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
SDF2-201ENST00000247020 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
SDF2-201ENST00000247020 TNNQ9UQP3 1299 aa18.08■□□□□ 0.48
SDF2-201ENST00000247020 CYP27B1O15528 508 aa18.07■□□□□ 0.48
SDF2-201ENST00000247020 CENPQQ7L2Z9 268 aaPredicted RBP18.07■□□□□ 0.48
SDF2-201ENST00000247020 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
SDF2-201ENST00000247020 HEG1Q9ULI3 1381 aa18.07■□□□□ 0.48
SDF2-201ENST00000247020 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
SDF2-201ENST00000247020 DISP2A7MBM2 1401 aa18.06■□□□□ 0.48
SDF2-201ENST00000247020 JCADQ9P266 1359 aa18.06■□□□□ 0.48
SDF2-201ENST00000247020 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
SDF2-201ENST00000247020 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
SDF2-201ENST00000247020 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
SDF2-201ENST00000247020 TMEM57Q8N5G2 664 aa18.04■□□□□ 0.48
SDF2-201ENST00000247020 RGS12O14924 1447 aa18.04■□□□□ 0.48
SDF2-201ENST00000247020 PAPPAQ13219 1627 aa18.04■□□□□ 0.48
SDF2-201ENST00000247020 SLIT2O94813 1529 aa18.04■□□□□ 0.48
SDF2-201ENST00000247020 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
SDF2-201ENST00000247020 LRP6O75581 1613 aa18.03■□□□□ 0.48
SDF2-201ENST00000247020 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
SDF2-201ENST00000247020 UBR2Q8IWV8 1755 aa18.03■□□□□ 0.48
SDF2-201ENST00000247020 LAMB4A4D0S4 1761 aa18.02■□□□□ 0.48
SDF2-201ENST00000247020 ERVV-2B6SEH9 535 aa18.02■□□□□ 0.48
SDF2-201ENST00000247020 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
SDF2-201ENST00000247020 THRAP3Q9Y2W1 955 aaKnown RBP18.02■□□□□ 0.48
SDF2-201ENST00000247020 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
SDF2-201ENST00000247020 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
SDF2-201ENST00000247020 TNKS1BP1Q9C0C2 1729 aaKnown RBP18■□□□□ 0.47
SDF2-201ENST00000247020 TOGARAM1Q9Y4F4 1720 aa18■□□□□ 0.47
SDF2-201ENST00000247020 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
SDF2-201ENST00000247020 INTS3Q68E01 1043 aaKnown RBP18■□□□□ 0.47
SDF2-201ENST00000247020 C5P01031 1676 aa18■□□□□ 0.47
SDF2-201ENST00000247020 ZNF790Q6PG37 636 aa18■□□□□ 0.47
SDF2-201ENST00000247020 ZBTB40Q9NUA8 1239 aa18■□□□□ 0.47
SDF2-201ENST00000247020 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
SDF2-201ENST00000247020 KCNQ3O43525 872 aa17.98■□□□□ 0.47
SDF2-201ENST00000247020 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
SDF2-201ENST00000247020 CABP4P57796 275 aa17.98■□□□□ 0.47
SDF2-201ENST00000247020 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
SDF2-201ENST00000247020 TNS2Q63HR2 1409 aa17.98■□□□□ 0.47
SDF2-201ENST00000247020 ADAMTS2O95450 1211 aa17.97■□□□□ 0.47
SDF2-201ENST00000247020 FLIIQ13045 1269 aa17.97■□□□□ 0.47
SDF2-201ENST00000247020 RWDD1Q9H446 243 aaPredicted RBP17.97■□□□□ 0.47
SDF2-201ENST00000247020 GLI3P10071 1580 aa17.97■□□□□ 0.47
SDF2-201ENST00000247020 ITGB4P16144 1822 aa17.97■□□□□ 0.47
SDF2-201ENST00000247020 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
SDF2-201ENST00000247020 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SDF2-201ENST00000247020 SPATA31A1Q5TZJ5 1347 aa17.96■□□□□ 0.47
SDF2-201ENST00000247020 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.46
SDF2-201ENST00000247020 PCDHB15Q9Y5E8 787 aa17.96■□□□□ 0.46
SDF2-201ENST00000247020 HDAC1Q13547 482 aaPredicted RBP17.95■□□□□ 0.46
SDF2-201ENST00000247020 DBF4Q9UBU7 674 aaPredicted RBP17.95■□□□□ 0.46
SDF2-201ENST00000247020 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
SDF2-201ENST00000247020 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
SDF2-201ENST00000247020 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
SDF2-201ENST00000247020 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
SDF2-201ENST00000247020 G2E3Q7L622 706 aa17.94■□□□□ 0.46
SDF2-201ENST00000247020 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
SDF2-201ENST00000247020 FMNL2Q96PY5 1086 aa17.94■□□□□ 0.46
SDF2-201ENST00000247020 USP35Q9P2H5 1018 aa17.94■□□□□ 0.46
SDF2-201ENST00000247020 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
SDF2-201ENST00000247020 IGHDP01880 384 aa17.92■□□□□ 0.46
SDF2-201ENST00000247020 FKBP5Q13451 457 aaPredicted RBP17.92■□□□□ 0.46
SDF2-201ENST00000247020 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
SDF2-201ENST00000247020 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
SDF2-201ENST00000247020 EXOC5O00471 708 aa17.91■□□□□ 0.46
SDF2-201ENST00000247020 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
SDF2-201ENST00000247020 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
SDF2-201ENST00000247020 SLC39A6Q13433 755 aa17.91■□□□□ 0.46
SDF2-201ENST00000247020 UNC5CLQ8IV45 518 aa17.91■□□□□ 0.46
SDF2-201ENST00000247020 HYPKQ9NX55 129 aa17.91■□□□□ 0.46
SDF2-201ENST00000247020 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
SDF2-201ENST00000247020 FNBP4Q8N3X1 1017 aaPredicted RBP17.9■□□□□ 0.46
SDF2-201ENST00000247020 NECTIN2Q92692 538 aa17.9■□□□□ 0.46
SDF2-201ENST00000247020 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
SDF2-201ENST00000247020 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
SDF2-201ENST00000247020 DOT1LQ8TEK3 1739 aa17.9■□□□□ 0.46
SDF2-201ENST00000247020 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
SDF2-201ENST00000247020 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
SDF2-201ENST00000247020 ATP10DQ9P241 1426 aa17.89■□□□□ 0.45
SDF2-201ENST00000247020 VPS72Q15906 364 aa17.88■□□□□ 0.45
SDF2-201ENST00000247020 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
SDF2-201ENST00000247020 IBTKQ9P2D0 1353 aaPredicted RBP17.88■□□□□ 0.45
SDF2-201ENST00000247020 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms