RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 GNAI3P08754 354 aa26.64■■□□□ 1.86
SH2D3A-201ENST00000245908 PDE1AP54750 535 aa26.64■■□□□ 1.86
SH2D3A-201ENST00000245908 CLEC17AQ6ZS10 378 aa26.64■■□□□ 1.86
SH2D3A-201ENST00000245908 IL17REQ8NFR9 667 aa26.64■■□□□ 1.86
SH2D3A-201ENST00000245908 NUTM2GQ5VZR2 741 aa26.64■■□□□ 1.85
SH2D3A-201ENST00000245908 ISY1Q9ULR0 285 aaKnown RBP26.64■■□□□ 1.85
SH2D3A-201ENST00000245908 REC8O95072 547 aa26.63■■□□□ 1.85
SH2D3A-201ENST00000245908 FKBP5Q13451 457 aaPredicted RBP26.63■■□□□ 1.85
SH2D3A-201ENST00000245908 SKOR2Q2VWA4 1001 aaPredicted RBP26.63■■□□□ 1.85
SH2D3A-201ENST00000245908 ABTB2Q8N961 1025 aa26.63■■□□□ 1.85
SH2D3A-201ENST00000245908 SALL3Q9BXA9 1300 aa26.62■■□□□ 1.85
SH2D3A-201ENST00000245908 LTN1O94822 1766 aa26.62■■□□□ 1.85
SH2D3A-201ENST00000245908 TAF7Q15545 349 aaPredicted RBP26.62■■□□□ 1.85
SH2D3A-201ENST00000245908 ERC2O15083 957 aa26.61■■□□□ 1.85
SH2D3A-201ENST00000245908 SSFA2P28290 1259 aa26.61■■□□□ 1.85
SH2D3A-201ENST00000245908 MRE11P49959 708 aa26.61■■□□□ 1.85
SH2D3A-201ENST00000245908 ATP8B2P98198 1209 aa26.6■■□□□ 1.85
SH2D3A-201ENST00000245908 ARXQ96QS3 562 aa26.6■■□□□ 1.85
SH2D3A-201ENST00000245908 EXOC6BQ9Y2D4 811 aa26.6■■□□□ 1.85
SH2D3A-201ENST00000245908 LRRCC1Q9C099 1032 aa26.58■■□□□ 1.85
SH2D3A-201ENST00000245908 LTV1Q96GA3 475 aaPredicted RBP26.58■■□□□ 1.84
SH2D3A-201ENST00000245908 CHD2O14647 1828 aaKnown RBP26.57■■□□□ 1.84
SH2D3A-201ENST00000245908 IBTKQ9P2D0 1353 aaPredicted RBP26.57■■□□□ 1.84
SH2D3A-201ENST00000245908 NECTIN2Q92692 538 aa26.57■■□□□ 1.84
SH2D3A-201ENST00000245908 PNMA6EA0A0J9YXQ4 647 aa26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 ST18O60284 1047 aa26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 RRAGDQ9NQL2 400 aaPredicted RBP26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 PANK2Q9BZ23 570 aa26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 MED1Q15648 1581 aaPredicted RBP26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 NFAT5O94916 1531 aa26.56■■□□□ 1.84
SH2D3A-201ENST00000245908 PHF8Q9UPP1 1060 aa26.55■■□□□ 1.84
SH2D3A-201ENST00000245908 CEMIPQ8WUJ3 1361 aa26.55■■□□□ 1.84
SH2D3A-201ENST00000245908 GRPEL1Q9HAV7 217 aa26.55■■□□□ 1.84
SH2D3A-201ENST00000245908 NUCB2P80303 420 aa26.54■■□□□ 1.84
SH2D3A-201ENST00000245908 AK9Q5TCS8 1911 aa26.54■■□□□ 1.84
SH2D3A-201ENST00000245908 GOLGA6L22H0YM25 854 aa26.54■■□□□ 1.84
SH2D3A-201ENST00000245908 BAG4O95429 457 aaKnown RBP26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 CYP2E1P05181 493 aaPredicted RBP26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 MX1P20591 662 aa26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 IP6K1Q92551 441 aa26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 LRRFIP2Q9Y608 721 aaKnown RBP26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 USHBP1Q8N6Y0 703 aa26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 CWC22Q9HCG8 908 aaKnown RBP26.53■■□□□ 1.84
SH2D3A-201ENST00000245908 HDGFL1Q5TGJ6 251 aa26.52■■□□□ 1.84
SH2D3A-201ENST00000245908 USP44Q9H0E7 712 aa26.52■■□□□ 1.84
SH2D3A-201ENST00000245908 KDM3BQ7LBC6 1761 aa26.52■■□□□ 1.84
SH2D3A-201ENST00000245908 GLIPR1L2Q4G1C9 344 aa26.51■■□□□ 1.84
SH2D3A-201ENST00000245908 STAP2Q9UGK3 403 aa26.51■■□□□ 1.84
SH2D3A-201ENST00000245908 PHRF1Q9P1Y6 1649 aaKnown RBP26.51■■□□□ 1.83
SH2D3A-201ENST00000245908 C14orf37Q86TY3 774 aa26.5■■□□□ 1.83
SH2D3A-201ENST00000245908 ESYT1Q9BSJ8 1104 aa26.5■■□□□ 1.83
SH2D3A-201ENST00000245908 SRCIN1Q9C0H9 1055 aa26.5■■□□□ 1.83
SH2D3A-201ENST00000245908 TSHZ3Q63HK5 1081 aa26.49■■□□□ 1.83
SH2D3A-201ENST00000245908 UBTFL1P0CB47 393 aaPredicted RBP26.49■■□□□ 1.83
SH2D3A-201ENST00000245908 LMO7Q8WWI1 1683 aa26.48■■□□□ 1.83
SH2D3A-201ENST00000245908 AOX1Q06278 1338 aa26.48■■□□□ 1.83
SH2D3A-201ENST00000245908 SSH3Q8TE77 659 aa26.48■■□□□ 1.83
SH2D3A-201ENST00000245908 PHAXQ9H814 394 aaKnown RBP26.47■■□□□ 1.83
SH2D3A-201ENST00000245908 HOXB7P09629 217 aa26.46■■□□□ 1.83
SH2D3A-201ENST00000245908 KLHL40Q2TBA0 621 aa26.46■■□□□ 1.83
SH2D3A-201ENST00000245908 GAS2L3Q86XJ1 694 aa26.46■■□□□ 1.83
SH2D3A-201ENST00000245908 NBPF6Q5VWK0 638 aa26.46■■□□□ 1.83
SH2D3A-201ENST00000245908 NBPF4Q96M43 638 aa26.46■■□□□ 1.83
SH2D3A-201ENST00000245908 CHMLP26374 656 aa26.45■■□□□ 1.83
SH2D3A-201ENST00000245908 EIF4A1P60842 406 aaKnown RBP26.45■■□□□ 1.83
SH2D3A-201ENST00000245908 RGPD2P0DJD1 1756 aa26.45■■□□□ 1.82
SH2D3A-201ENST00000245908 ZNF142P52746 1687 aaPredicted RBP26.44■■□□□ 1.82
SH2D3A-201ENST00000245908 ADGRL3Q9HAR2 1447 aa26.43■■□□□ 1.82
SH2D3A-201ENST00000245908 ZGPATQ8N5A5 531 aaKnown RBP26.43■■□□□ 1.82
SH2D3A-201ENST00000245908 RAB11FIP3O75154 756 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 POLA2Q14181 598 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 KCNH5Q8NCM2 988 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 PKNOX2Q96KN3 472 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 CHMP4AQ9BY43 222 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 MCCP23508 829 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 ANAPC15P60006 121 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 PKP1Q13835 747 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 ANKLE2Q86XL3 938 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 LGR6Q9HBX8 967 aa26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 DDX49Q9Y6V7 483 aaKnown RBP26.42■■□□□ 1.82
SH2D3A-201ENST00000245908 TRIM6-TRIM34B2RNG4 842 aa26.41■■□□□ 1.82
SH2D3A-201ENST00000245908 MCM2P49736 904 aa26.41■■□□□ 1.82
SH2D3A-201ENST00000245908 RILPL2Q969X0 211 aa26.41■■□□□ 1.82
SH2D3A-201ENST00000245908 IL17RAQ96F46 866 aa26.41■■□□□ 1.82
SH2D3A-201ENST00000245908 SETD1BQ9UPS6 1966 aaKnown RBP26.41■■□□□ 1.82
SH2D3A-201ENST00000245908 MCTP1Q6DN14 999 aa26.4■■□□□ 1.82
SH2D3A-201ENST00000245908 NEK4P51957 841 aa26.4■■□□□ 1.82
SH2D3A-201ENST00000245908 PPP1R42Q7Z4L9 355 aa26.4■■□□□ 1.82
SH2D3A-201ENST00000245908 EIF2S2P20042 333 aaKnown RBP26.39■■□□□ 1.82
SH2D3A-201ENST00000245908 CLCN1P35523 988 aa26.39■■□□□ 1.81
SH2D3A-201ENST00000245908 PSME1Q06323 249 aa26.39■■□□□ 1.81
SH2D3A-201ENST00000245908 AKAP4Q5JQC9 854 aa26.39■■□□□ 1.81
SH2D3A-201ENST00000245908 LMBRD1Q9NUN5 540 aa26.39■■□□□ 1.81
SH2D3A-201ENST00000245908 EPB41L2O43491 1005 aaKnown RBP26.38■■□□□ 1.81
SH2D3A-201ENST00000245908 UNC5CLQ8IV45 518 aa26.38■■□□□ 1.81
SH2D3A-201ENST00000245908 CHPF2Q9P2E5 772 aa26.38■■□□□ 1.81
SH2D3A-201ENST00000245908 ZDHHC9Q9Y397 364 aa26.38■■□□□ 1.81
SH2D3A-201ENST00000245908 NCAPD2Q15021 1401 aa26.38■■□□□ 1.81
SH2D3A-201ENST00000245908 TMX3Q96JJ7 454 aa26.37■■□□□ 1.81
SH2D3A-201ENST00000245908 ANO2Q9NQ90 1003 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms