RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 ERCC4Q92889 916 aaPredicted RBP18.8■□□□□ 0.6
LRRFIP1-201ENST00000244815 CLCN1P35523 988 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 TXLNAP40222 546 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 PPFIBP1Q86W92 1011 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 CKAP2LQ8IYA6 745 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 MEIS3Q99687 375 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 ADGRL1O94910 1474 aa18.79■□□□□ 0.6
LRRFIP1-201ENST00000244815 NACAP1Q9BZK3 213 aa18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 TFIP11Q9UBB9 837 aaKnown RBP18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 STX6O43752 255 aa18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 TRIM34Q9BYJ4 488 aa18.78■□□□□ 0.6
LRRFIP1-201ENST00000244815 SNX21Q969T3 373 aa18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 ZNF608Q9ULD9 1512 aaPredicted RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 PIP4K2AP48426 406 aaPredicted RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 LARP1Q6PKG0 1096 aaKnown RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 ECHDC1Q9NTX5 307 aa18.77■□□□□ 0.6
LRRFIP1-201ENST00000244815 CBFA2T2O43439 604 aa18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 NUP133Q8WUM0 1156 aa18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 CARD14Q9BXL6 1004 aa18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 PDCL3Q9H2J4 239 aa18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 CWC15Q9P013 229 aaKnown RBP18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 U3KPZ7 1027 aaPredicted RBP18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 ANKRD36BQ8N2N9 1353 aa18.77■□□□□ 0.59
LRRFIP1-201ENST00000244815 CDKL5O76039 1030 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 DACH1Q9UI36 760 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 CCDC69A6NI79 296 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 PTPN14Q15678 1187 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 CFAP100Q494V2 611 aa18.76■□□□□ 0.59
LRRFIP1-201ENST00000244815 MCM5P33992 734 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 PPP1R42Q7Z4L9 355 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 UBXN4Q92575 508 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 MAGEC2Q9UBF1 373 aaPredicted RBP18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 ADCY5O95622 1261 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 TOM1L2Q6ZVM7 507 aa18.75■□□□□ 0.59
LRRFIP1-201ENST00000244815 SMTNL1A8MU46 457 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 PRKCSHP14314 528 aaPredicted RBP18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 ANO10Q9NW15 660 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 DBF4Q9UBU7 674 aaPredicted RBP18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 IMMTQ16891 758 aaKnown RBP18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 NUP160Q12769 1436 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 PDE1AP54750 535 aa18.74■□□□□ 0.59
LRRFIP1-201ENST00000244815 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 GUCY1B3Q02153 619 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 MPRIPQ6WCQ1 1025 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 EPS15P42566 896 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 MPHOSPH8Q99549 860 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 ZBTB40Q9NUA8 1239 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 GJB2P29033 226 aa18.73■□□□□ 0.59
LRRFIP1-201ENST00000244815 CDR1P51861 262 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 UBE2HP62256 183 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 LRSAM1Q6UWE0 723 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 TCEAL9Q9UHQ7 104 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 PI4KAP2A4QPH2 592 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 MRPL50Q8N5N7 158 aaKnown RBP18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 PI4KAP1Q8N8J0 262 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 DDX19AQ9NUU7 478 aaKnown RBP18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 SLC3A2P08195 630 aaKnown RBP18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 CBX1P83916 185 aa18.72■□□□□ 0.59
LRRFIP1-201ENST00000244815 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 AXDND1Q5T1B0 1012 aaPredicted RBP18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 CLIP2Q9UDT6 1046 aa18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 KIF18AQ8NI77 898 aa18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 C16orf45Q96MC5 204 aaPredicted RBP18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 LEKR1Q6ZMV7 388 aa18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 MYD88Q99836 296 aa18.71■□□□□ 0.59
LRRFIP1-201ENST00000244815 ATP10BO94823 1461 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 ZNF165P49910 485 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 KIF2AO00139 706 aaPredicted RBP18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 VAMP4O75379 141 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 TDO2P48775 406 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 HSP90AB2PQ58FF8 381 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 TNNT1P13805 278 aa18.7■□□□□ 0.58
LRRFIP1-201ENST00000244815 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms