RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 USP19O94966 1318 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 IQGAP2Q13576 1575 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 GJB2P29033 226 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 LMAN1P49257 510 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 NGDNQ8NEJ9 315 aaKnown RBP11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 SMARCE1Q969G3 411 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 TOMM22Q9NS69 142 aa11.21□□□□□ -0.62
NUDCD1-201ENST00000239690 ERC1Q8IUD2 1116 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 TRDNQ13061 729 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 CFAP100Q494V2 611 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 JMYQ8N9B5 988 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 SYNJ2O15056 1496 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 PZPP20742 1482 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 GTF2A1P52655 376 aaPredicted RBP11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
NUDCD1-201ENST00000239690 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 DDX58O95786 925 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 CDR1P51861 262 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 STX1AQ16623 288 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 ANO6Q4KMQ2 910 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 AFAP1Q8N556 730 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 PCMTD1Q96MG8 357 aaPredicted RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 LARP6Q9BRS8 491 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 RAB11FIP3O75154 756 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 PPFIBP1Q86W92 1011 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
NUDCD1-201ENST00000239690 DHX16O60231 1041 aaKnown RBP11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 F13A1P00488 732 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 KRT32Q14532 448 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 ANKRD44Q8N8A2 993 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 ESYT1Q9BSJ8 1104 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 FAM107BQ9H098 131 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 SRGAP3O43295 1099 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 TYRO3Q06418 890 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 NSD2O96028 1365 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 GLRX3O76003 335 aaKnown RBP11.18□□□□□ -0.62
NUDCD1-201ENST00000239690 CASQ1P31415 396 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 KIF1BPQ96EK5 621 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 DCTPP1Q9H773 170 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 ARFGAP3Q9NP61 516 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 PDE1AP54750 535 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 GPATCH11Q8N954 259 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 RASSF4Q9H2L5 321 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 TUBB4AP04350 444 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 DNM1Q05193 864 aaKnown RBP11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 TMC6Q7Z403 805 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 C16orf71Q8IYS4 520 aaPredicted RBP11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 TRMT2AQ8IZ69 625 aaKnown RBP11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 DDX11Q96FC9 970 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 IVLP07476 585 aa11.17□□□□□ -0.62
NUDCD1-201ENST00000239690 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 ARHGEF11O15085 1522 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 MLECQ14165 292 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 PRAM1Q96QH2 718 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 ZNF521Q96K83 1311 aa11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 SRRTQ9BXP5 876 aaKnown RBP11.16□□□□□ -0.62
NUDCD1-201ENST00000239690 PTPRCP08575 1304 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 A0A0G2JS52 829 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 CCDC191Q8NCU4 936 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 GIMAP7Q8NHV1 300 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 DNAJC25Q9H1X3 360 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 DNAI1Q9UI46 699 aa11.15□□□□□ -0.62
NUDCD1-201ENST00000239690 KIAA0586Q9BVV6 1533 aa11.15□□□□□ -0.63
NUDCD1-201ENST00000239690 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 C10orf67Q8IYJ2 551 aa11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
NUDCD1-201ENST00000239690 GTF3C6Q969F1 213 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms