RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
YIPF4-201ENST00000238831 TMX1Q9H3N1 280 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 ADAMTS2O95450 1211 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 CCDC82Q8N4S0 544 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 SRCIN1Q9C0H9 1055 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 SAMM50Q9Y512 469 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 CRACR2AQ9BSW2 395 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 TMCO5BA8MYB1 307 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 PTCD1O75127 700 aaKnown RBP10.1□□□□□ -0.79
YIPF4-201ENST00000238831 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
YIPF4-201ENST00000238831 EHMT1Q9H9B1 1298 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
YIPF4-201ENST00000238831 SMTNL1A8MU46 457 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 RANBP6O60518 1105 aaKnown RBP10.1□□□□□ -0.79
YIPF4-201ENST00000238831 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 CAMK4Q16566 473 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 PDZRN3Q9UPQ7 1066 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 PKNOX2Q96KN3 472 aa10.1□□□□□ -0.79
YIPF4-201ENST00000238831 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 RGS22Q8NE09 1264 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
YIPF4-201ENST00000238831 TSNARE1Q96NA8 513 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 ANKRD18BA2A2Z9 1011 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 CASTP20810 708 aaKnown RBP10.09□□□□□ -0.79
YIPF4-201ENST00000238831 CASQ1P31415 396 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 NUP62CLQ9H1M0 184 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 SYCP3Q8IZU3 236 aa10.09□□□□□ -0.79
YIPF4-201ENST00000238831 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
YIPF4-201ENST00000238831 GCOM1H8Y6P7 765 aaPredicted RBP10.08□□□□□ -0.8
YIPF4-201ENST00000238831 MYZAPP0CAP1 466 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 CDK19Q9BWU1 502 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 MMRN2Q9H8L6 949 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 PRPF4BQ13523 1007 aaKnown RBP10.08□□□□□ -0.8
YIPF4-201ENST00000238831 LRSAM1Q6UWE0 723 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 IL1RAPL2Q9NP60 686 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 TMEM266Q2M3C6 531 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 OTUD6BQ8N6M0 293 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 BICD1Q96G01 975 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 C16orf71Q8IYS4 520 aaPredicted RBP10.08□□□□□ -0.8
YIPF4-201ENST00000238831 VAT1LQ9HCJ6 419 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 ADAMTS8Q9UP79 889 aa10.08□□□□□ -0.8
YIPF4-201ENST00000238831 TDRD12Q587J7 1177 aaKnown RBP10.07□□□□□ -0.8
YIPF4-201ENST00000238831 NAPBQ9H115 298 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 CCDC88BA6NC98 1476 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 CBX1P83916 185 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 ZWINTO95229 277 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 TMOD3Q9NYL9 352 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 GUCY1B3Q02153 619 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 FGFR1OPO95684 399 aaKnown RBP10.07□□□□□ -0.8
YIPF4-201ENST00000238831 RNF187Q5TA31 235 aaPredicted RBP10.07□□□□□ -0.8
YIPF4-201ENST00000238831 PRC1O43663 620 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 TCERG1LQ5VWI1 586 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 SYNCQ9H7C4 482 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 APBB1IPQ7Z5R6 666 aaPredicted RBP10.07□□□□□ -0.8
YIPF4-201ENST00000238831 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 PPP1R14CQ8TAE6 165 aa10.07□□□□□ -0.8
YIPF4-201ENST00000238831 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 SHTN1A0MZ66 631 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 UQCRHP07919 91 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 NUP88Q99567 741 aaPredicted RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 MPRIPQ6WCQ1 1025 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 NUTM1Q86Y26 1132 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 ZNF622Q969S3 477 aaKnown RBP eCLIP10.06□□□□□ -0.81e-7■□□□□ 9.9
YIPF4-201ENST00000238831 RAB3IL1Q8TBN0 382 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 IFIT1P09914 478 aaKnown RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 THEMISQ8N1K5 641 aaPredicted RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 SPATA24Q86W54 205 aa10.06□□□□□ -0.8
YIPF4-201ENST00000238831 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
YIPF4-201ENST00000238831 KRT32Q14532 448 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 NLRP5P59047 1200 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
YIPF4-201ENST00000238831 KIF5CO60282 957 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 AAMPQ13685 434 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 HLTFQ14527 1009 aaKnown RBP eCLIP10.05□□□□□ -0.8
YIPF4-201ENST00000238831 NOP2P46087 812 aaKnown RBP10.05□□□□□ -0.8
YIPF4-201ENST00000238831 KIF20AO95235 890 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 CETN1Q12798 172 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
YIPF4-201ENST00000238831 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 MPHOSPH6Q99547 160 aaKnown RBP10.05□□□□□ -0.8
YIPF4-201ENST00000238831 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
YIPF4-201ENST00000238831 SH3BP5O60239 455 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
YIPF4-201ENST00000238831 CPLX3Q8WVH0 158 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms