RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
NPC2-201ENST00000238633 BCS1LQ9Y276 419 aa13.23□□□□□ -0.29
NPC2-201ENST00000238633 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
NPC2-201ENST00000238633 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
NPC2-201ENST00000238633 HMGB2P26583 209 aaKnown RBP13.22□□□□□ -0.29
NPC2-201ENST00000238633 PRELPP51888 382 aa13.22□□□□□ -0.29
NPC2-201ENST00000238633 SIK1P57059 783 aa13.22□□□□□ -0.29
NPC2-201ENST00000238633 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
NPC2-201ENST00000238633 CARD11Q9BXL7 1154 aa13.22□□□□□ -0.29
NPC2-201ENST00000238633 FYB1O15117 783 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 GNPATO15228 680 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 DPEP1P16444 411 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 KCNA3P22001 575 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 TGFB2P61812 414 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
NPC2-201ENST00000238633 ASAP1Q9ULH1 1129 aa13.21□□□□□ -0.29
NPC2-201ENST00000238633 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
NPC2-201ENST00000238633 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.3
NPC2-201ENST00000238633 KIAA1551Q9HCM1 1747 aa13.2□□□□□ -0.3
NPC2-201ENST00000238633 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
NPC2-201ENST00000238633 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
NPC2-201ENST00000238633 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
NPC2-201ENST00000238633 TESK2Q96S53 571 aa13.2□□□□□ -0.3
NPC2-201ENST00000238633 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
NPC2-201ENST00000238633 FSTL1Q12841 308 aa13.19□□□□□ -0.3
NPC2-201ENST00000238633 GGNBP2Q9H3C7 697 aa13.19□□□□□ -0.3
NPC2-201ENST00000238633 C10orf71Q711Q0 1435 aa13.19□□□□□ -0.3
NPC2-201ENST00000238633 INSRP06213 1382 aa13.19□□□□□ -0.3
NPC2-201ENST00000238633 FCHSD2O94868 740 aa13.18□□□□□ -0.3
NPC2-201ENST00000238633 SLC4A9Q96Q91 983 aa13.18□□□□□ -0.3
NPC2-201ENST00000238633 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
NPC2-201ENST00000238633 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
NPC2-201ENST00000238633 ATG3Q9NT62 314 aa13.17□□□□□ -0.3
NPC2-201ENST00000238633 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
NPC2-201ENST00000238633 TMF1P82094 1093 aa13.16□□□□□ -0.3
NPC2-201ENST00000238633 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
NPC2-201ENST00000238633 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
NPC2-201ENST00000238633 SMG6Q86US8 1419 aaKnown RBP13.15□□□□□ -0.3
NPC2-201ENST00000238633 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
NPC2-201ENST00000238633 GYS1P13807 737 aa13.15□□□□□ -0.3
NPC2-201ENST00000238633 NLGN1Q8N2Q7 840 aa13.15□□□□□ -0.3
NPC2-201ENST00000238633 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
NPC2-201ENST00000238633 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
NPC2-201ENST00000238633 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
NPC2-201ENST00000238633 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
NPC2-201ENST00000238633 DCAF5Q96JK2 942 aa13.14□□□□□ -0.31
NPC2-201ENST00000238633 TMOD3Q9NYL9 352 aa13.14□□□□□ -0.31
NPC2-201ENST00000238633 FLT4P35916 1363 aa13.14□□□□□ -0.31
NPC2-201ENST00000238633 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
NPC2-201ENST00000238633 KDRP35968 1356 aa13.13□□□□□ -0.31
NPC2-201ENST00000238633 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
NPC2-201ENST00000238633 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
NPC2-201ENST00000238633 EMILIN1Q9Y6C2 1016 aa13.13□□□□□ -0.31
NPC2-201ENST00000238633 ITGB4P16144 1822 aa13.13□□□□□ -0.31
NPC2-201ENST00000238633 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
NPC2-201ENST00000238633 RNF181Q9P0P0 153 aa13.12□□□□□ -0.31
NPC2-201ENST00000238633 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
NPC2-201ENST00000238633 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
NPC2-201ENST00000238633 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
NPC2-201ENST00000238633 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
NPC2-201ENST00000238633 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
NPC2-201ENST00000238633 PHKG2P15735 406 aa13.11□□□□□ -0.31
NPC2-201ENST00000238633 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
NPC2-201ENST00000238633 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
NPC2-201ENST00000238633 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
NPC2-201ENST00000238633 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 DDR1Q08345 913 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 DALRD3Q5D0E6 543 aaKnown RBP13.1□□□□□ -0.31
NPC2-201ENST00000238633 SMC1BQ8NDV3 1235 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 EYA1Q99502 592 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPC2-201ENST00000238633 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
NPC2-201ENST00000238633 RPS6KA4O75676 772 aa13.09□□□□□ -0.31
NPC2-201ENST00000238633 CHRNA5P30532 468 aa13.09□□□□□ -0.31
NPC2-201ENST00000238633 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 RFC4P35249 363 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 FKBP8Q14318 412 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
NPC2-201ENST00000238633 CNTNAP4Q9C0A0 1308 aa13.08□□□□□ -0.32
NPC2-201ENST00000238633 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
NPC2-201ENST00000238633 BRCA1P38398 1863 aaKnown RBP13.07□□□□□ -0.32
NPC2-201ENST00000238633 POTECB2RU33 542 aa13.06□□□□□ -0.32
NPC2-201ENST00000238633 RASSF7Q02833 373 aa13.06□□□□□ -0.32
NPC2-201ENST00000238633 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
NPC2-201ENST00000238633 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
NPC2-201ENST00000238633 PPM1GO15355 546 aaPredicted RBP13.05□□□□□ -0.32
NPC2-201ENST00000238633 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
NPC2-201ENST00000238633 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
NPC2-201ENST00000238633 POLRMTO00411 1230 aaKnown RBP13.04□□□□□ -0.32
NPC2-201ENST00000238633 TM4SF1P30408 202 aa13.04□□□□□ -0.32
NPC2-201ENST00000238633 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
NPC2-201ENST00000238633 ARFGEF1Q9Y6D6 1849 aa13.03□□□□□ -0.32
NPC2-201ENST00000238633 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
NPC2-201ENST00000238633 SLC34A2O95436 690 aa13.02□□□□□ -0.33
NPC2-201ENST00000238633 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
NPC2-201ENST00000238633 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
NPC2-201ENST00000238633 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms