RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 RTCBQ9Y3I0 505 aaKnown RBP13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 TUBGCP6Q96RT7 1819 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 LY75O60449 1722 aa13.76□□□□□ -0.21
NDUFB3-201ENST00000237889 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
NDUFB3-201ENST00000237889 TMC1Q8TDI8 760 aa13.75□□□□□ -0.21
NDUFB3-201ENST00000237889 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
NDUFB3-201ENST00000237889 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
NDUFB3-201ENST00000237889 HOXC9P31274 260 aa13.74□□□□□ -0.21
NDUFB3-201ENST00000237889 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
NDUFB3-201ENST00000237889 RFC4P35249 363 aa13.73□□□□□ -0.21
NDUFB3-201ENST00000237889 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
NDUFB3-201ENST00000237889 COG3Q96JB2 828 aa13.73□□□□□ -0.21
NDUFB3-201ENST00000237889 LMNB1P20700 586 aa13.72□□□□□ -0.21
NDUFB3-201ENST00000237889 DSG3P32926 999 aa13.72□□□□□ -0.21
NDUFB3-201ENST00000237889 LINC00116Q8NCU8 138 aa13.72□□□□□ -0.21
NDUFB3-201ENST00000237889 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
NDUFB3-201ENST00000237889 KCNA3P22001 575 aa13.71□□□□□ -0.21
NDUFB3-201ENST00000237889 PIGBQ92521 554 aa13.71□□□□□ -0.21
NDUFB3-201ENST00000237889 CCDC85CA6NKD9 419 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 LBX1P52954 281 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 TMOD3Q9NYL9 352 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
NDUFB3-201ENST00000237889 MAP3K19Q56UN5 1328 aa13.69□□□□□ -0.22
NDUFB3-201ENST00000237889 RGS19P49795 217 aa13.69□□□□□ -0.22
NDUFB3-201ENST00000237889 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
NDUFB3-201ENST00000237889 KIAA1210Q9ULL0 1709 aa13.69□□□□□ -0.22
NDUFB3-201ENST00000237889 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 DOT1LQ8TEK3 1739 aa13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 ZNF219Q9P2Y4 722 aaPredicted RBP13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 C5P01031 1676 aa13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 MEGF6O75095 1541 aa13.68□□□□□ -0.22
NDUFB3-201ENST00000237889 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
NDUFB3-201ENST00000237889 SPG7Q9UQ90 795 aa13.67□□□□□ -0.22
NDUFB3-201ENST00000237889 CYP27B1O15528 508 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 GYS1P13807 737 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 ITPK1Q13572 414 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 WBP1LQ9NX94 342 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
NDUFB3-201ENST00000237889 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
NDUFB3-201ENST00000237889 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
NDUFB3-201ENST00000237889 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
NDUFB3-201ENST00000237889 NKX1-1Q15270 411 aaPredicted RBP13.64□□□□□ -0.23
NDUFB3-201ENST00000237889 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
NDUFB3-201ENST00000237889 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
NDUFB3-201ENST00000237889 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 CHRNA5P30532 468 aa13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 VEGFBP49765 207 aa13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 TNRC6CQ9HCJ0 1690 aaKnown RBP13.63□□□□□ -0.23
NDUFB3-201ENST00000237889 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
NDUFB3-201ENST00000237889 RASSF7Q02833 373 aa13.62□□□□□ -0.23
NDUFB3-201ENST00000237889 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
NDUFB3-201ENST00000237889 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
NDUFB3-201ENST00000237889 IQCA1LA6NCM1 817 aa13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 POTECB2RU33 542 aa13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 HSPA8P11142 646 aaKnown RBP13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
NDUFB3-201ENST00000237889 LTN1O94822 1766 aa13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 ERFEQ4G0M1 354 aa13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
NDUFB3-201ENST00000237889 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
NDUFB3-201ENST00000237889 ABCB7O75027 752 aa13.58□□□□□ -0.24
NDUFB3-201ENST00000237889 FBLN1P23142 703 aa13.58□□□□□ -0.24
NDUFB3-201ENST00000237889 LDHDQ86WU2 507 aa13.58□□□□□ -0.24
NDUFB3-201ENST00000237889 N4BP2Q86UW6 1770 aaPredicted RBP13.57□□□□□ -0.24
NDUFB3-201ENST00000237889 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
NDUFB3-201ENST00000237889 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
NDUFB3-201ENST00000237889 KIF13BQ9NQT8 1826 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 H0YIN7 160 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 ZPR1O75312 459 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 FKBP8Q14318 412 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 INSRP06213 1382 aa13.56□□□□□ -0.24
NDUFB3-201ENST00000237889 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 DDR1Q08345 913 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
NDUFB3-201ENST00000237889 PKD1L3Q7Z443 1732 aa13.54□□□□□ -0.24
NDUFB3-201ENST00000237889 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
NDUFB3-201ENST00000237889 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
NDUFB3-201ENST00000237889 POLRMTO00411 1230 aaKnown RBP13.54□□□□□ -0.24
NDUFB3-201ENST00000237889 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms