RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 MTHFSP49914 203 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 LINC00116Q8NCU8 138 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 AK7Q96M32 723 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 POLD1P28340 1107 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 ITPK1Q13572 414 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
GTF2H3-201ENST00000228955 TOGARAM1Q9Y4F4 1720 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 U2SURPO15042 1029 aaKnown RBP9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 GNPATO15228 680 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 CABP4P57796 275 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 ATG3Q9NT62 314 aa9.33□□□□□ -0.92
GTF2H3-201ENST00000228955 PAPPAQ13219 1627 aa9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 LOC102724428A0A0B4J2F2 783 aa9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 SIK1P57059 783 aa9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 MKRN4PQ13434 485 aaPredicted RBP9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 PLEKHO1Q53GL0 409 aaPredicted RBP9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 ITGB4P16144 1822 aa9.32□□□□□ -0.92
GTF2H3-201ENST00000228955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
GTF2H3-201ENST00000228955 SLC39A6Q13433 755 aa9.31□□□□□ -0.92
GTF2H3-201ENST00000228955 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
GTF2H3-201ENST00000228955 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
GTF2H3-201ENST00000228955 LGR6Q9HBX8 967 aa9.31□□□□□ -0.92
GTF2H3-201ENST00000228955 IL13P35225 146 aa9.3□□□□□ -0.92
GTF2H3-201ENST00000228955 SMARCC1Q92922 1105 aaPredicted RBP9.3□□□□□ -0.92
GTF2H3-201ENST00000228955 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
GTF2H3-201ENST00000228955 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
GTF2H3-201ENST00000228955 LY75O60449 1722 aa9.3□□□□□ -0.92
GTF2H3-201ENST00000228955 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
GTF2H3-201ENST00000228955 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
GTF2H3-201ENST00000228955 YBX3P16989 372 aaKnown RBP eCLIP9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 KIF24Q5T7B8 1368 aa9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 C5P01031 1676 aa9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 ZNF330Q9Y3S2 320 aaPredicted RBP9.28□□□□□ -0.92
GTF2H3-201ENST00000228955 KDM6AO15550 1401 aaPredicted RBP9.27□□□□□ -0.92
GTF2H3-201ENST00000228955 PER1O15534 1290 aaPredicted RBP9.27□□□□□ -0.93
GTF2H3-201ENST00000228955 MTHFSDQ2M296 383 aaKnown RBP9.27□□□□□ -0.93
GTF2H3-201ENST00000228955 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
GTF2H3-201ENST00000228955 DCAF5Q96JK2 942 aa9.27□□□□□ -0.93
GTF2H3-201ENST00000228955 C4BP0C0L5 1744 aa9.26□□□□□ -0.93
GTF2H3-201ENST00000228955 MMP10P09238 476 aa9.26□□□□□ -0.93
GTF2H3-201ENST00000228955 ZNF784Q8NCA9 323 aaPredicted RBP9.26□□□□□ -0.93
GTF2H3-201ENST00000228955 ARHGEF1Q92888 912 aaKnown RBP9.26□□□□□ -0.93
GTF2H3-201ENST00000228955 TAF1LQ8IZX4 1826 aa9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 AMOTQ4VCS5 1084 aa9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 DNAJC10Q8IXB1 793 aa9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.25□□□□□ -0.934e-9■■■■■ 35
GTF2H3-201ENST00000228955 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
GTF2H3-201ENST00000228955 NCAPD2Q15021 1401 aa9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 A0A0G2JLW4 131 aa9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 HSP90AB1P08238 724 aaKnown RBP9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 RFC4P35249 363 aa9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 PIP4K2AP48426 406 aaPredicted RBP9.24□□□□□ -0.93
GTF2H3-201ENST00000228955 HAX1O00165 279 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 CANXP27824 592 aaKnown RBP9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 DCTN1Q14203 1278 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 PHACTR3Q96KR7 559 aa9.23□□□□□ -0.93
GTF2H3-201ENST00000228955 KCNQ3O43525 872 aa9.22□□□□□ -0.93
GTF2H3-201ENST00000228955 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
GTF2H3-201ENST00000228955 PRKAR2BP31323 418 aa9.22□□□□□ -0.93
GTF2H3-201ENST00000228955 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.93
GTF2H3-201ENST00000228955 FLAD1Q8NFF5 587 aa9.22□□□□□ -0.93
GTF2H3-201ENST00000228955 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 SSFA2P28290 1259 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 FKBP8Q14318 412 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 MCM10Q7L590 875 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 SLC52A2Q9HAB3 445 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 MIS18AQ9NYP9 233 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 BCS1LQ9Y276 419 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 UBR3Q6ZT12 1888 aa9.21□□□□□ -0.93
GTF2H3-201ENST00000228955 GYS1P13807 737 aa9.21□□□□□ -0.94
GTF2H3-201ENST00000228955 USPL1Q5W0Q7 1092 aa9.21□□□□□ -0.94
GTF2H3-201ENST00000228955 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 DPEP1P16444 411 aa9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 PPP2R1AP30153 589 aa9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 INTS5Q6P9B9 1019 aaKnown RBP9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 IL17REQ8NFR9 667 aa9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 PARP3Q9Y6F1 533 aa9.2□□□□□ -0.94
GTF2H3-201ENST00000228955 QSER1Q2KHR3 1735 aa9.19□□□□□ -0.94
GTF2H3-201ENST00000228955 KDRP35968 1356 aa9.19□□□□□ -0.94
GTF2H3-201ENST00000228955 SPDYE2BA6NHP3 402 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms