RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 KDRP35968 1356 aa14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 IL2RBP14784 551 aa14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 NAP1L5Q96NT1 182 aaPredicted RBP14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 SEC24BO95487 1268 aa14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 ZNF853P0CG23 659 aa14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 AIMP1Q12904 312 aaKnown RBP14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
TNFAIP1-201ENST00000226225 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
TNFAIP1-201ENST00000226225 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
TNFAIP1-201ENST00000226225 F6X3S4 739 aa14.67□□□□□ -0.06
TNFAIP1-201ENST00000226225 ALDH1L2Q3SY69 923 aa14.67□□□□□ -0.06
TNFAIP1-201ENST00000226225 NRKQ7Z2Y5 1582 aa14.66□□□□□ -0.06
TNFAIP1-201ENST00000226225 MVPQ14764 893 aaKnown RBP14.66□□□□□ -0.06
TNFAIP1-201ENST00000226225 API5Q9BZZ5 524 aaKnown RBP14.66□□□□□ -0.06
TNFAIP1-201ENST00000226225 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 PEAK1Q9H792 1746 aa14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 APBB1O00213 710 aa14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 EXOC5O00471 708 aa14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 PHKG2P15735 406 aa14.65□□□□□ -0.06
TNFAIP1-201ENST00000226225 MYL6BP14649 208 aa14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 PXDNQ92626 1479 aa14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 CYP27B1O15528 508 aa14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 RRAGDQ9NQL2 400 aaPredicted RBP14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 HSP90AB1P08238 724 aaKnown RBP14.64□□□□□ -0.07
TNFAIP1-201ENST00000226225 G2E3Q7L622 706 aa14.63□□□□□ -0.07
TNFAIP1-201ENST00000226225 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
TNFAIP1-201ENST00000226225 CARD10Q9BWT7 1032 aa14.63□□□□□ -0.07
TNFAIP1-201ENST00000226225 IGHDP01880 384 aa14.62□□□□□ -0.07
TNFAIP1-201ENST00000226225 DCAF5Q96JK2 942 aa14.62□□□□□ -0.07
TNFAIP1-201ENST00000226225 KDM2BQ8NHM5 1336 aa14.62□□□□□ -0.07
TNFAIP1-201ENST00000226225 NFAT5O94916 1531 aa14.62□□□□□ -0.07
TNFAIP1-201ENST00000226225 KIF1AQ12756 1690 aa14.62□□□□□ -0.07
TNFAIP1-201ENST00000226225 RWDD1Q9H446 243 aaPredicted RBP14.61□□□□□ -0.07
TNFAIP1-201ENST00000226225 PRAMEF22A3QJZ6 481 aa14.61□□□□□ -0.07
TNFAIP1-201ENST00000226225 FAM43AQ8N2R8 423 aa14.61□□□□□ -0.07
TNFAIP1-201ENST00000226225 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
TNFAIP1-201ENST00000226225 FLIIQ13045 1269 aa14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 ACSBG1Q96GR2 724 aa14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 PHAXQ9H814 394 aaKnown RBP14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 SLC52A2Q9HAB3 445 aa14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
TNFAIP1-201ENST00000226225 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 MED1Q15648 1581 aaPredicted RBP14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 FAM98CQ17RN3 349 aaKnown RBP14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 PCDHB15Q9Y5E8 787 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 CPDO75976 1380 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 DDB1Q16531 1140 aa14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 CHMP4BQ9H444 224 aaKnown RBP14.59□□□□□ -0.07
TNFAIP1-201ENST00000226225 VSIG10Q8N0Z9 540 aa14.58□□□□□ -0.08
TNFAIP1-201ENST00000226225 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
TNFAIP1-201ENST00000226225 CHMP4AQ9BY43 222 aa14.58□□□□□ -0.08
TNFAIP1-201ENST00000226225 CRB1P82279 1406 aa14.58□□□□□ -0.08
TNFAIP1-201ENST00000226225 BECN1Q14457 450 aa14.58□□□□□ -0.08
TNFAIP1-201ENST00000226225 HSPA1LP34931 641 aa14.57□□□□□ -0.08
TNFAIP1-201ENST00000226225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.08
TNFAIP1-201ENST00000226225 RIC3Q7Z5B4 369 aa14.56□□□□□ -0.08
TNFAIP1-201ENST00000226225 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
TNFAIP1-201ENST00000226225 PI4KAP2A4QPH2 592 aa14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 PI4KAP1Q8N8J0 262 aa14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 SLIT3O75094 1523 aa14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 MEGF6O75095 1541 aa14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 DBF4Q9UBU7 674 aaPredicted RBP14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 USP21Q9UK80 565 aa14.55□□□□□ -0.08
TNFAIP1-201ENST00000226225 GIGYF1O75420 1035 aaPredicted RBP14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 FAM182BQ5T319 152 aa14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 LTN1O94822 1766 aa14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 CAMTA1Q9Y6Y1 1673 aa14.54□□□□□ -0.08
TNFAIP1-201ENST00000226225 SNRPA1P09661 255 aaKnown RBP14.53□□□□□ -0.08
TNFAIP1-201ENST00000226225 PRIM1P49642 420 aaKnown RBP14.53□□□□□ -0.08
TNFAIP1-201ENST00000226225 C9orf78Q9NZ63 289 aaPredicted RBP14.53□□□□□ -0.08
TNFAIP1-201ENST00000226225 ANKRD45Q5TZF3 282 aa14.53□□□□□ -0.08
TNFAIP1-201ENST00000226225 MEIS3Q99687 375 aa14.53□□□□□ -0.08
TNFAIP1-201ENST00000226225 DDX58O95786 925 aaKnown RBP14.52□□□□□ -0.09
TNFAIP1-201ENST00000226225 PROSER3Q2NL68 480 aa14.52□□□□□ -0.09
TNFAIP1-201ENST00000226225 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.09
TNFAIP1-201ENST00000226225 PTPRCP08575 1304 aa14.52□□□□□ -0.09
TNFAIP1-201ENST00000226225 GOLGA6L3A6NEY3 463 aa14.52□□□□□ -0.09
TNFAIP1-201ENST00000226225 COL5A2P05997 1499 aaPredicted RBP14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 SRCIN1Q9C0H9 1055 aa14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 ASAP1Q9ULH1 1129 aa14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
TNFAIP1-201ENST00000226225 NEXNQ0ZGT2 675 aa14.5□□□□□ -0.09
TNFAIP1-201ENST00000226225 COPS6Q7L5N1 327 aa14.5□□□□□ -0.09
TNFAIP1-201ENST00000226225 ZBTB40Q9NUA8 1239 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms