RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 H3BQV1 296 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
RAB3D-201ENST00000222120 EVA1CP58658 441 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 PHF14O94880 888 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 SNX21Q969T3 373 aa16.38■□□□□ 0.21
RAB3D-201ENST00000222120 MCM2P49736 904 aa16.37■□□□□ 0.21
RAB3D-201ENST00000222120 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
RAB3D-201ENST00000222120 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
RAB3D-201ENST00000222120 FLT4P35916 1363 aa16.37■□□□□ 0.21
RAB3D-201ENST00000222120 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
RAB3D-201ENST00000222120 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
RAB3D-201ENST00000222120 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
RAB3D-201ENST00000222120 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
RAB3D-201ENST00000222120 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
RAB3D-201ENST00000222120 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
RAB3D-201ENST00000222120 PNMA6EA0A0J9YXQ4 647 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 ESPNB1AK53 854 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 LAMC1P11047 1609 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
RAB3D-201ENST00000222120 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
RAB3D-201ENST00000222120 HOXC9P31274 260 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 MAP3K2Q9Y2U5 619 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 ABCC4O15439 1325 aa16.36■□□□□ 0.21
RAB3D-201ENST00000222120 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
RAB3D-201ENST00000222120 CCDC85AQ96PX6 553 aaPredicted RBP16.35■□□□□ 0.21
RAB3D-201ENST00000222120 LGR6Q9HBX8 967 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 GLI2P10070 1586 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 RNF20Q5VTR2 975 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 TMX3Q96JJ7 454 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
RAB3D-201ENST00000222120 ADGRB3O60242 1522 aa16.35■□□□□ 0.21
RAB3D-201ENST00000222120 FERMT3Q86UX7 667 aa16.34■□□□□ 0.21
RAB3D-201ENST00000222120 STRN4Q9NRL3 753 aa16.34■□□□□ 0.21
RAB3D-201ENST00000222120 ATP8B2P98198 1209 aa16.34■□□□□ 0.21
RAB3D-201ENST00000222120 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
RAB3D-201ENST00000222120 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.21
RAB3D-201ENST00000222120 TULP4Q9NRJ4 1543 aa16.33■□□□□ 0.21
RAB3D-201ENST00000222120 PTCD1O75127 700 aaKnown RBP16.33■□□□□ 0.21
RAB3D-201ENST00000222120 CHRNA2Q15822 529 aa16.33■□□□□ 0.21
RAB3D-201ENST00000222120 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.21
RAB3D-201ENST00000222120 FBXW7Q969H0 707 aa16.33■□□□□ 0.21
RAB3D-201ENST00000222120 ABCA9Q8IUA7 1624 aa16.33■□□□□ 0.2
RAB3D-201ENST00000222120 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.2
RAB3D-201ENST00000222120 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
RAB3D-201ENST00000222120 RAB3GAP1Q15042 981 aa16.33■□□□□ 0.2
RAB3D-201ENST00000222120 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
RAB3D-201ENST00000222120 ESYT1Q9BSJ8 1104 aa16.33■□□□□ 0.2
RAB3D-201ENST00000222120 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
RAB3D-201ENST00000222120 TSPOAP1O95153 1857 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 MBD3O95983 291 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 CWF19L2Q2TBE0 894 aaKnown RBP16.32■□□□□ 0.2
RAB3D-201ENST00000222120 CHAMP1Q96JM3 812 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 ANTXR1Q9H6X2 564 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 CYP46A1Q9Y6A2 500 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
RAB3D-201ENST00000222120 BICD2Q8TD16 824 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 ANKRD24Q8TF21 1146 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 ZNF853P0CG23 659 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 MYD88Q99836 296 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 TOMM22Q9NS69 142 aa16.32■□□□□ 0.2
RAB3D-201ENST00000222120 KDM4AO75164 1064 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
RAB3D-201ENST00000222120 CABP4P57796 275 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 IQGAP1P46940 1657 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 QRICH2Q9H0J4 1663 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 INO80Q9ULG1 1556 aaPredicted RBP16.31■□□□□ 0.2
RAB3D-201ENST00000222120 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 NPHP1O15259 732 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 R3HCC1Q9Y3T6 440 aaKnown RBP16.31■□□□□ 0.2
RAB3D-201ENST00000222120 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
RAB3D-201ENST00000222120 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 PKNOX2Q96KN3 472 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 PDRG1Q9NUG6 133 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 KCNQ3O43525 872 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 ERC1Q8IUD2 1116 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
RAB3D-201ENST00000222120 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
RAB3D-201ENST00000222120 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 FAM177BA6PVY3 158 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 KRT28Q7Z3Y7 464 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 ORAI2Q96SN7 254 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 NBPF7P0C2Y1 421 aaPredicted RBP16.29■□□□□ 0.2
RAB3D-201ENST00000222120 CPA1P15085 419 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 PKP1Q13835 747 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 WASHC4Q2M389 1173 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
RAB3D-201ENST00000222120 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
RAB3D-201ENST00000222120 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms