RNA–Protein interactions for RNA: ENST00000217260.8

RSPO4-201, Transcript of R-spondin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO4, Length 2,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-201ENST00000217260 PDE1AP54750 535 aa22.55■■□□□ 1.2
RSPO4-201ENST00000217260 GNAT3A8MTJ3 354 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 OSBPL3Q9H4L5 887 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 FLIIQ13045 1269 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 FKBP5Q13451 457 aaPredicted RBP22.54■■□□□ 1.2
RSPO4-201ENST00000217260 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 CLEC17AQ6ZS10 378 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 EXOC6BQ9Y2D4 811 aa22.54■■□□□ 1.2
RSPO4-201ENST00000217260 GOLGA6L22H0YM25 854 aa22.53■■□□□ 1.2
RSPO4-201ENST00000217260 PDCL3Q9H2J4 239 aa22.53■■□□□ 1.2
RSPO4-201ENST00000217260 ERC2O15083 957 aa22.53■■□□□ 1.2
RSPO4-201ENST00000217260 NECTIN2Q92692 538 aa22.53■■□□□ 1.2
RSPO4-201ENST00000217260 HOXC9P31274 260 aa22.52■■□□□ 1.2
RSPO4-201ENST00000217260 AK9Q5TCS8 1911 aa22.52■■□□□ 1.2
RSPO4-201ENST00000217260 ST18O60284 1047 aa22.51■■□□□ 1.19
RSPO4-201ENST00000217260 BAG4O95429 457 aaKnown RBP22.51■■□□□ 1.19
RSPO4-201ENST00000217260 GNAI3P08754 354 aa22.51■■□□□ 1.19
RSPO4-201ENST00000217260 THEMISQ8N1K5 641 aaPredicted RBP22.5■■□□□ 1.19
RSPO4-201ENST00000217260 NUCB2P80303 420 aa22.5■■□□□ 1.19
RSPO4-201ENST00000217260 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
RSPO4-201ENST00000217260 CCDC173Q0VFZ6 552 aa22.49■■□□□ 1.19
RSPO4-201ENST00000217260 KIAA1211Q6ZU35 1233 aa22.49■■□□□ 1.19
RSPO4-201ENST00000217260 IL17REQ8NFR9 667 aa22.49■■□□□ 1.19
RSPO4-201ENST00000217260 LRRCC1Q9C099 1032 aa22.49■■□□□ 1.19
RSPO4-201ENST00000217260 LTV1Q96GA3 475 aaPredicted RBP22.49■■□□□ 1.19
RSPO4-201ENST00000217260 TSHZ3Q63HK5 1081 aa22.48■■□□□ 1.19
RSPO4-201ENST00000217260 ANP32BQ92688 251 aaKnown RBP22.48■■□□□ 1.19
RSPO4-201ENST00000217260 PNMA6EA0A0J9YXQ4 647 aa22.48■■□□□ 1.19
RSPO4-201ENST00000217260 ABTB2Q8N961 1025 aa22.48■■□□□ 1.19
RSPO4-201ENST00000217260 MAP3K5Q99683 1374 aa22.47■■□□□ 1.19
RSPO4-201ENST00000217260 FAM208AQ9UK61 1670 aaKnown RBP22.47■■□□□ 1.19
RSPO4-201ENST00000217260 ATP8B2P98198 1209 aa22.47■■□□□ 1.19
RSPO4-201ENST00000217260 TAF7Q15545 349 aaPredicted RBP22.47■■□□□ 1.19
RSPO4-201ENST00000217260 CWC22Q9HCG8 908 aaKnown RBP22.47■■□□□ 1.19
RSPO4-201ENST00000217260 SALL3Q9BXA9 1300 aa22.47■■□□□ 1.19
RSPO4-201ENST00000217260 ANKARQ7Z5J8 1434 aa22.46■■□□□ 1.19
RSPO4-201ENST00000217260 DDX49Q9Y6V7 483 aaKnown RBP22.46■■□□□ 1.19
RSPO4-201ENST00000217260 KCNA6P17658 529 aa22.46■■□□□ 1.19
RSPO4-201ENST00000217260 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
RSPO4-201ENST00000217260 XRN1Q8IZH2 1706 aaKnown RBP22.45■■□□□ 1.19
RSPO4-201ENST00000217260 CYP2E1P05181 493 aaPredicted RBP22.45■■□□□ 1.19
RSPO4-201ENST00000217260 MX1P20591 662 aa22.45■■□□□ 1.18
RSPO4-201ENST00000217260 KLHL40Q2TBA0 621 aa22.45■■□□□ 1.18
RSPO4-201ENST00000217260 SOS1Q07889 1333 aaPredicted RBP22.45■■□□□ 1.18
RSPO4-201ENST00000217260 NASPP49321 788 aaPredicted RBP22.44■■□□□ 1.18
RSPO4-201ENST00000217260 PKP1Q13835 747 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 ZSCAN30Q86W11 494 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 LRRFIP2Q9Y608 721 aaKnown RBP22.44■■□□□ 1.18
RSPO4-201ENST00000217260 MCTP1Q6DN14 999 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 ZGPATQ8N5A5 531 aaKnown RBP22.44■■□□□ 1.18
RSPO4-201ENST00000217260 CACNA1FO60840 1977 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 PPP1R9BQ96SB3 815 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 BABAM1Q9NWV8 329 aa22.44■■□□□ 1.18
RSPO4-201ENST00000217260 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
RSPO4-201ENST00000217260 MARF1Q9Y4F3 1742 aaKnown RBP22.43■■□□□ 1.18
RSPO4-201ENST00000217260 MSNP26038 577 aaKnown RBP22.43■■□□□ 1.18
RSPO4-201ENST00000217260 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
RSPO4-201ENST00000217260 USHBP1Q8N6Y0 703 aa22.42■■□□□ 1.18
RSPO4-201ENST00000217260 ESYT1Q9BSJ8 1104 aa22.42■■□□□ 1.18
RSPO4-201ENST00000217260 USP44Q9H0E7 712 aa22.42■■□□□ 1.18
RSPO4-201ENST00000217260 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
RSPO4-201ENST00000217260 TRIM6-TRIM34B2RNG4 842 aa22.41■■□□□ 1.18
RSPO4-201ENST00000217260 RILPL2Q969X0 211 aa22.41■■□□□ 1.18
RSPO4-201ENST00000217260 OFD1O75665 1012 aa22.4■■□□□ 1.18
RSPO4-201ENST00000217260 UBTFL1P0CB47 393 aaPredicted RBP22.4■■□□□ 1.18
RSPO4-201ENST00000217260 NEK4P51957 841 aa22.4■■□□□ 1.18
RSPO4-201ENST00000217260 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.4■■□□□ 1.18
RSPO4-201ENST00000217260 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.17
RSPO4-201ENST00000217260 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
RSPO4-201ENST00000217260 STAP2Q9UGK3 403 aa22.39■■□□□ 1.17
RSPO4-201ENST00000217260 TUBGCP6Q96RT7 1819 aa22.39■■□□□ 1.17
RSPO4-201ENST00000217260 PXDNLA1KZ92 1463 aa22.39■■□□□ 1.17
RSPO4-201ENST00000217260 CHMLP26374 656 aa22.38■■□□□ 1.17
RSPO4-201ENST00000217260 LMBRD1Q9NUN5 540 aa22.38■■□□□ 1.17
RSPO4-201ENST00000217260 USP54Q70EL1 1684 aa22.37■■□□□ 1.17
RSPO4-201ENST00000217260 FER1L4A9Z1Z3 1794 aa22.37■■□□□ 1.17
RSPO4-201ENST00000217260 MCCP23508 829 aa22.37■■□□□ 1.17
RSPO4-201ENST00000217260 ANO2Q9NQ90 1003 aa22.37■■□□□ 1.17
RSPO4-201ENST00000217260 ZDHHC9Q9Y397 364 aa22.37■■□□□ 1.17
RSPO4-201ENST00000217260 NCLP19338 710 aaKnown RBP22.36■■□□□ 1.17
RSPO4-201ENST00000217260 N4BP2Q86UW6 1770 aaPredicted RBP22.36■■□□□ 1.17
RSPO4-201ENST00000217260 SSH3Q8TE77 659 aa22.36■■□□□ 1.17
RSPO4-201ENST00000217260 TMX3Q96JJ7 454 aa22.36■■□□□ 1.17
RSPO4-201ENST00000217260 TERF1P54274 439 aa22.35■■□□□ 1.17
RSPO4-201ENST00000217260 IL1RAPL2Q9NP60 686 aa22.35■■□□□ 1.17
RSPO4-201ENST00000217260 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
RSPO4-201ENST00000217260 UNC5CLQ8IV45 518 aa22.35■■□□□ 1.17
RSPO4-201ENST00000217260 PALD1Q9ULE6 856 aa22.35■■□□□ 1.17
RSPO4-201ENST00000217260 PHF8Q9UPP1 1060 aa22.35■■□□□ 1.17
RSPO4-201ENST00000217260 MCM2P49736 904 aa22.34■■□□□ 1.17
RSPO4-201ENST00000217260 CAVIN1Q6NZI2 390 aaKnown RBP22.34■■□□□ 1.17
RSPO4-201ENST00000217260 IP6K1Q92551 441 aa22.34■■□□□ 1.17
RSPO4-201ENST00000217260 CEMIPQ8WUJ3 1361 aa22.34■■□□□ 1.17
RSPO4-201ENST00000217260 ANAPC15P60006 121 aa22.33■■□□□ 1.16
RSPO4-201ENST00000217260 PPP1R42Q7Z4L9 355 aa22.33■■□□□ 1.16
RSPO4-201ENST00000217260 LTN1O94822 1766 aa22.32■■□□□ 1.16
RSPO4-201ENST00000217260 PRPF40AO75400 957 aaKnown RBP22.32■■□□□ 1.16
RSPO4-201ENST00000217260 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
RSPO4-201ENST00000217260 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms