RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
MTHFD1-201ENST00000216605 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-201ENST00000216605 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
MTHFD1-201ENST00000216605 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-201ENST00000216605 FAM43AQ8N2R8 423 aa11.12□□□□□ -0.63
MTHFD1-201ENST00000216605 APBB1O00213 710 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 CCDC30Q5VVM6 783 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 F6X3S4 739 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
MTHFD1-201ENST00000216605 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 BRPF1P55201 1214 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 IPO4Q8TEX9 1081 aaKnown RBP11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 CRB1P82279 1406 aa11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 G2E3Q7L622 706 aa11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 SLAIN2Q9P270 581 aa11.1□□□□□ -0.63
MTHFD1-201ENST00000216605 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 HDAC1Q13547 482 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 PRDM11Q9NQV5 511 aa11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 KIAA0232Q92628 1395 aa11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 MST1RQ04912 1400 aa11.09□□□□□ -0.63
MTHFD1-201ENST00000216605 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
MTHFD1-201ENST00000216605 ABCC4O15439 1325 aa11.08□□□□□ -0.64
MTHFD1-201ENST00000216605 PTPRCP08575 1304 aa11.08□□□□□ -0.64
MTHFD1-201ENST00000216605 C8orf34Q49A92 452 aa11.08□□□□□ -0.64
MTHFD1-201ENST00000216605 LTN1O94822 1766 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 FLIIQ13045 1269 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 USP19O94966 1318 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 ERBB3P21860 1342 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 EVA1CP58658 441 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
MTHFD1-201ENST00000216605 KCNQ3O43525 872 aa11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 HSP90AA1P07900 732 aaKnown RBP11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 MEIS3Q99687 375 aa11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 SPG7Q9UQ90 795 aa11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 NFAT5O94916 1531 aa11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 RGPD1P0DJD0 1748 aa11.06□□□□□ -0.64
MTHFD1-201ENST00000216605 ANXA1P04083 346 aa11.05□□□□□ -0.64
MTHFD1-201ENST00000216605 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
MTHFD1-201ENST00000216605 INTS3Q68E01 1043 aaKnown RBP11.05□□□□□ -0.64
MTHFD1-201ENST00000216605 CHD1LQ86WJ1 897 aa11.05□□□□□ -0.64
MTHFD1-201ENST00000216605 GCC1Q96CN9 775 aa11.05□□□□□ -0.64
MTHFD1-201ENST00000216605 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 GTF2E1P29083 439 aaPredicted RBP11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 PHAXQ9H814 394 aaKnown RBP11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 DCCP43146 1447 aa11.04□□□□□ -0.64
MTHFD1-201ENST00000216605 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 HMMRO75330 724 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 EIF4A1P60842 406 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 NUCB1Q02818 461 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 PRDM4Q9UKN5 801 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
MTHFD1-201ENST00000216605 AIMP1Q12904 312 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 KIF1AQ12756 1690 aa11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 SEC24BO95487 1268 aa11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 IFNL2Q8IZJ0 200 aa11.02□□□□□ -0.65
MTHFD1-201ENST00000216605 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 GNAI2P04899 355 aa11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 RPAP2Q8IXW5 612 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 GNAI3P08754 354 aa11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 BCCIPQ9P287 314 aaKnown RBP eCLIP11.01□□□□□ -0.65
MTHFD1-201ENST00000216605 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
MTHFD1-201ENST00000216605 STRCP1A6NGW2 1772 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 UBTFL1P0CB47 393 aaPredicted RBP11□□□□□ -0.65
MTHFD1-201ENST00000216605 ANKRD44Q8N8A2 993 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 A0A0G2JS52 829 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 PI4KAP2A4QPH2 592 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 CABP4P57796 275 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 CEP85Q6P2H3 762 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 PI4KAP1Q8N8J0 262 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 SRCIN1Q9C0H9 1055 aa11□□□□□ -0.65
MTHFD1-201ENST00000216605 SLIT3O75094 1523 aa10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 MYL6BP14649 208 aa10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 RGPD2P0DJD1 1756 aa10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
MTHFD1-201ENST00000216605 PHKG2P15735 406 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms