RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 HSP90AA4PQ58FG1 418 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 AIDAQ96BJ3 306 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 GOLGA6L10A6NI86 522 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 MAP3K11Q16584 847 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 TBC1D2Q9BYX2 928 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 NFE2L2Q16236 605 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 JMYQ8N9B5 988 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 TNPO1Q92973 898 aaKnown RBP15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 CCDC113Q9H0I3 377 aa15.97■□□□□ 0.15
TGFBR3-201ENST00000212355 ANXA1P04083 346 aa15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 SRRTQ9BXP5 876 aaKnown RBP15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 RARSP54136 660 aaKnown RBP15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 C16orf45Q96MC5 204 aaPredicted RBP15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 STIM1Q13586 685 aa15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 CEP126Q9P2H0 1117 aa15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 CCDC66A2RUB6 948 aa15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 HAND2P61296 217 aa15.96■□□□□ 0.15
TGFBR3-201ENST00000212355 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.14
TGFBR3-201ENST00000212355 CCP110O43303 1012 aa15.95■□□□□ 0.14
TGFBR3-201ENST00000212355 LIG1P18858 919 aa15.95■□□□□ 0.14
TGFBR3-201ENST00000212355 GPTP24298 496 aa15.95■□□□□ 0.14
TGFBR3-201ENST00000212355 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
TGFBR3-201ENST00000212355 SNRKQ9NRH2 765 aa15.95■□□□□ 0.14
TGFBR3-201ENST00000212355 MYO6Q9UM54 1294 aa15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 EPB41L2O43491 1005 aaKnown RBP15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 IMMTQ16891 758 aaKnown RBP15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 BCCIPQ9P287 314 aaKnown RBP eCLIP15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 HMGN5P82970 282 aaKnown RBP15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
TGFBR3-201ENST00000212355 PIP4K2AP48426 406 aaPredicted RBP15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 URI1O94763 535 aaPredicted RBP15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 DACH1Q9UI36 760 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 KIAA0754O94854 1291 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 ZSWIM4Q9H7M6 989 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 LRRC2Q9BYS8 371 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 RANBP6O60518 1105 aaKnown RBP15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 CLIP2Q9UDT6 1046 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 DAPK1P53355 1430 aa15.93■□□□□ 0.14
TGFBR3-201ENST00000212355 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
TGFBR3-201ENST00000212355 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
TGFBR3-201ENST00000212355 CBFA2T2O43439 604 aa15.92■□□□□ 0.14
TGFBR3-201ENST00000212355 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
TGFBR3-201ENST00000212355 ERLIN2O94905 339 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 CASQ1P31415 396 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 ARHGAP29Q52LW3 1261 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 MTERF4Q7Z6M4 381 aaKnown RBP15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 ANKRD30BQ9BXX2 1392 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 IFIT1P09914 478 aaKnown RBP15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 GJB2P29033 226 aa15.91■□□□□ 0.14
TGFBR3-201ENST00000212355 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 TRIM27P14373 513 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 NECAB1Q8N987 351 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 ZBTB3Q9H5J0 574 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 ADAMTS2O95450 1211 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 TBC1D9Q6ZT07 1266 aa15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 SPTY2D1Q68D10 685 aaPredicted RBP15.9■□□□□ 0.14
TGFBR3-201ENST00000212355 FCHSD2O94868 740 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 CCDC178Q5BJE1 867 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 TTC16Q8NEE8 873 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 RBM25P49756 843 aaKnown RBP15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 TERF1P54274 439 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 ANKIB1Q9P2G1 1089 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 SYNJ2O15056 1496 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 TNNQ9UQP3 1299 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 MMRN2Q9H8L6 949 aa15.89■□□□□ 0.13
TGFBR3-201ENST00000212355 ZSCAN25Q6NSZ9 544 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 ZSCAN31Q96LW9 406 aaPredicted RBP15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 DTNBO60941 627 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 UBXN4Q92575 508 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 GOLIM4O00461 696 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 ZSCAN30Q86W11 494 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 KIF1BPQ96EK5 621 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 CDKL5O76039 1030 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 GIMAP6Q6P9H5 292 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 TMC6Q7Z403 805 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
TGFBR3-201ENST00000212355 C8orf76Q96K31 380 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 MKNK2Q9HBH9 465 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 ADCY5O95622 1261 aa15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 C16orf71Q8IYS4 520 aaPredicted RBP15.87■□□□□ 0.13
TGFBR3-201ENST00000212355 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms