RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 CSB-PGBD3P0DP91 1061 aa23.48■■□□□ 1.35
CTSA-201ENST00000191018 TATP17735 454 aaPredicted RBP23.48■■□□□ 1.35
CTSA-201ENST00000191018 HOXB7P09629 217 aa23.47■■□□□ 1.35
CTSA-201ENST00000191018 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
CTSA-201ENST00000191018 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
CTSA-201ENST00000191018 BTBD11A6QL63 1104 aa23.46■■□□□ 1.35
CTSA-201ENST00000191018 C8orf34Q49A92 452 aa23.46■■□□□ 1.35
CTSA-201ENST00000191018 PRDM11Q9NQV5 511 aa23.45■■□□□ 1.35
CTSA-201ENST00000191018 SPG7Q9UQ90 795 aa23.45■■□□□ 1.35
CTSA-201ENST00000191018 COL5A2P05997 1499 aaPredicted RBP23.45■■□□□ 1.34
CTSA-201ENST00000191018 KCNQ3O43525 872 aa23.44■■□□□ 1.34
CTSA-201ENST00000191018 C1orf115Q9H7X2 142 aa23.44■■□□□ 1.34
CTSA-201ENST00000191018 WDR17Q8IZU2 1322 aa23.44■■□□□ 1.34
CTSA-201ENST00000191018 LTBP4Q8N2S1 1624 aa23.44■■□□□ 1.34
CTSA-201ENST00000191018 KDM6AO15550 1401 aaPredicted RBP23.44■■□□□ 1.34
CTSA-201ENST00000191018 FLIIQ13045 1269 aa23.43■■□□□ 1.34
CTSA-201ENST00000191018 PARP4Q9UKK3 1724 aaKnown RBP23.43■■□□□ 1.34
CTSA-201ENST00000191018 HEG1Q9ULI3 1381 aa23.43■■□□□ 1.34
CTSA-201ENST00000191018 ROBO1Q9Y6N7 1651 aa23.43■■□□□ 1.34
CTSA-201ENST00000191018 PHKG2P15735 406 aa23.43■■□□□ 1.34
CTSA-201ENST00000191018 HDGFL1Q5TGJ6 251 aa23.43■■□□□ 1.34
CTSA-201ENST00000191018 SIRT2Q8IXJ6 389 aa23.42■■□□□ 1.34
CTSA-201ENST00000191018 CHMP4AQ9BY43 222 aa23.41■■□□□ 1.34
CTSA-201ENST00000191018 CCT4P50991 539 aaKnown RBP23.41■■□□□ 1.34
CTSA-201ENST00000191018 AHDC1Q5TGY3 1603 aaPredicted RBP23.4■■□□□ 1.34
CTSA-201ENST00000191018 MRC1P22897 1456 aa23.4■■□□□ 1.34
CTSA-201ENST00000191018 ATP10DQ9P241 1426 aa23.4■■□□□ 1.34
CTSA-201ENST00000191018 IFNL2Q8IZJ0 200 aa23.4■■□□□ 1.34
CTSA-201ENST00000191018 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
CTSA-201ENST00000191018 PXDNLA1KZ92 1463 aa23.39■■□□□ 1.34
CTSA-201ENST00000191018 GCC1Q96CN9 775 aa23.39■■□□□ 1.34
CTSA-201ENST00000191018 F6X3S4 739 aa23.39■■□□□ 1.33
CTSA-201ENST00000191018 NUCB1Q02818 461 aa23.39■■□□□ 1.33
CTSA-201ENST00000191018 CYP27B1O15528 508 aa23.37■■□□□ 1.33
CTSA-201ENST00000191018 FKBP5Q13451 457 aaPredicted RBP23.37■■□□□ 1.33
CTSA-201ENST00000191018 ANP32AP39687 249 aaKnown RBP23.36■■□□□ 1.33
CTSA-201ENST00000191018 MEIS3Q99687 375 aa23.36■■□□□ 1.33
CTSA-201ENST00000191018 SLC52A2Q9HAB3 445 aa23.36■■□□□ 1.33
CTSA-201ENST00000191018 COL22A1Q8NFW1 1626 aaPredicted RBP23.36■■□□□ 1.33
CTSA-201ENST00000191018 MSH5O43196 834 aa23.36■■□□□ 1.33
CTSA-201ENST00000191018 GIGYF1O75420 1035 aaPredicted RBP23.35■■□□□ 1.33
CTSA-201ENST00000191018 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
CTSA-201ENST00000191018 DCAF5Q96JK2 942 aa23.35■■□□□ 1.33
CTSA-201ENST00000191018 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
CTSA-201ENST00000191018 RPAP2Q8IXW5 612 aaPredicted RBP23.34■■□□□ 1.33
CTSA-201ENST00000191018 ANKRD44Q8N8A2 993 aa23.34■■□□□ 1.33
CTSA-201ENST00000191018 CARD10Q9BWT7 1032 aa23.34■■□□□ 1.33
CTSA-201ENST00000191018 EIF2S2P20042 333 aaKnown RBP23.34■■□□□ 1.33
CTSA-201ENST00000191018 PHAXQ9H814 394 aaKnown RBP23.34■■□□□ 1.33
CTSA-201ENST00000191018 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.33
CTSA-201ENST00000191018 HSP90AB1P08238 724 aaKnown RBP23.33■■□□□ 1.33
CTSA-201ENST00000191018 CHD1LQ86WJ1 897 aa23.33■■□□□ 1.33
CTSA-201ENST00000191018 CHPF2Q9P2E5 772 aa23.33■■□□□ 1.33
CTSA-201ENST00000191018 CEP85Q6P2H3 762 aa23.32■■□□□ 1.32
CTSA-201ENST00000191018 ZNF790Q6PG37 636 aa23.32■■□□□ 1.32
CTSA-201ENST00000191018 C5P01031 1676 aa23.31■■□□□ 1.32
CTSA-201ENST00000191018 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
CTSA-201ENST00000191018 DCTPP1Q9H773 170 aa23.3■■□□□ 1.32
CTSA-201ENST00000191018 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
CTSA-201ENST00000191018 DBF4Q9UBU7 674 aaPredicted RBP23.3■■□□□ 1.32
CTSA-201ENST00000191018 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
CTSA-201ENST00000191018 PCDH11XQ9BZA7 1347 aa23.29■■□□□ 1.32
CTSA-201ENST00000191018 PCDH11YQ9BZA8 1340 aa23.29■■□□□ 1.32
CTSA-201ENST00000191018 IPO9Q96P70 1041 aaKnown RBP23.28■■□□□ 1.32
CTSA-201ENST00000191018 LARP1Q6PKG0 1096 aaKnown RBP23.28■■□□□ 1.32
CTSA-201ENST00000191018 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
CTSA-201ENST00000191018 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.32
CTSA-201ENST00000191018 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
CTSA-201ENST00000191018 IL2RBP14784 551 aa23.27■■□□□ 1.32
CTSA-201ENST00000191018 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
CTSA-201ENST00000191018 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
CTSA-201ENST00000191018 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
CTSA-201ENST00000191018 GNAI3P08754 354 aa23.26■■□□□ 1.31
CTSA-201ENST00000191018 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
CTSA-201ENST00000191018 EVA1CP58658 441 aa23.26■■□□□ 1.31
CTSA-201ENST00000191018 GLI3P10071 1580 aa23.25■■□□□ 1.31
CTSA-201ENST00000191018 GNAI2P04899 355 aa23.25■■□□□ 1.31
CTSA-201ENST00000191018 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
CTSA-201ENST00000191018 ADCY9O60503 1353 aa23.24■■□□□ 1.31
CTSA-201ENST00000191018 ANXA1P04083 346 aa23.24■■□□□ 1.31
CTSA-201ENST00000191018 PI4KAP2A4QPH2 592 aa23.23■■□□□ 1.31
CTSA-201ENST00000191018 PI4KAP1Q8N8J0 262 aa23.23■■□□□ 1.31
CTSA-201ENST00000191018 DNAAF4Q8WXU2 420 aa23.23■■□□□ 1.31
CTSA-201ENST00000191018 USP44Q9H0E7 712 aa23.23■■□□□ 1.31
CTSA-201ENST00000191018 PHLPP1O60346 1717 aa23.23■■□□□ 1.31
CTSA-201ENST00000191018 PROSER3Q2NL68 480 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
CTSA-201ENST00000191018 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 UBR2Q8IWV8 1755 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 CABP4P57796 275 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 PDIA6Q15084 440 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 BEND3Q5T5X7 828 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 ZNF496Q96IT1 587 aaPredicted RBP23.22■■□□□ 1.31
CTSA-201ENST00000191018 SRCIN1Q9C0H9 1055 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 BTG4Q9NY30 223 aa23.22■■□□□ 1.31
CTSA-201ENST00000191018 PAPPAQ13219 1627 aa23.21■■□□□ 1.31
CTSA-201ENST00000191018 HMMRO75330 724 aa23.21■■□□□ 1.31
CTSA-201ENST00000191018 SEC24BO95487 1268 aa23.21■■□□□ 1.31
CTSA-201ENST00000191018 PLCH1Q4KWH8 1693 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms