RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 PTPN14Q15678 1187 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 FILIP1Q7Z7B0 1213 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 ANKRD44Q8N8A2 993 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 INTS4Q96HW7 963 aaKnown RBP11.99□□□□□ -0.49
CLDN18-201ENST00000183605 PLCH2O75038 1416 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 FER1L4A9Z1Z3 1794 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 NRDCO43847 1150 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 LUZP1Q86V48 1076 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
CLDN18-201ENST00000183605 FBLN1P23142 703 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
CLDN18-201ENST00000183605 NFE2L2Q16236 605 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 C8orf58Q8NAV2 365 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 NOL10Q9BSC4 688 aaKnown RBP11.98□□□□□ -0.49
CLDN18-201ENST00000183605 ESYT1Q9BSJ8 1104 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 CLIP2Q9UDT6 1046 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 PALD1Q9ULE6 856 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 PDE1AP54750 535 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 DNM1Q05193 864 aaKnown RBP11.98□□□□□ -0.49
CLDN18-201ENST00000183605 POLR3GO15318 223 aaPredicted RBP11.98□□□□□ -0.49
CLDN18-201ENST00000183605 GGT6Q6P531 493 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 ZNF397Q8NF99 534 aaPredicted RBP11.98□□□□□ -0.49
CLDN18-201ENST00000183605 FAM200AQ8TCP9 573 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 SAMD9LQ8IVG5 1584 aa11.98□□□□□ -0.49
CLDN18-201ENST00000183605 MLH3Q9UHC1 1453 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 ANKRD36BQ8N2N9 1353 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
CLDN18-201ENST00000183605 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
CLDN18-201ENST00000183605 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 MEIS3Q99687 375 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 ZC3H13Q5T200 1668 aaKnown RBP11.97□□□□□ -0.49
CLDN18-201ENST00000183605 PTPRTO14522 1441 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 HOMER1Q86YM7 354 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 ANKRD7Q92527 254 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 CTNNA3Q9UI47 895 aa11.97□□□□□ -0.49
CLDN18-201ENST00000183605 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
CLDN18-201ENST00000183605 CD109Q6YHK3 1445 aa11.96□□□□□ -0.49
CLDN18-201ENST00000183605 KDM5AP29375 1690 aaKnown RBP11.96□□□□□ -0.49
CLDN18-201ENST00000183605 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.49
CLDN18-201ENST00000183605 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
CLDN18-201ENST00000183605 PLEKHF1Q96S99 279 aa11.96□□□□□ -0.49
CLDN18-201ENST00000183605 SYT1P21579 422 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 KRT85P78386 507 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 TERF2Q15554 542 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.5
CLDN18-201ENST00000183605 CEP85Q6P2H3 762 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 GTF3C6Q969F1 213 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 LRRCC1Q9C099 1032 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 SYCP2Q9BX26 1530 aa11.96□□□□□ -0.5
CLDN18-201ENST00000183605 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 DDX54Q8TDD1 881 aaKnown RBP11.95□□□□□ -0.5
CLDN18-201ENST00000183605 KCNF1Q9H3M0 494 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
CLDN18-201ENST00000183605 NOS1P29475 1434 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 F13A1P00488 732 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 GPS2Q13227 327 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 LARP1BQ659C4 914 aaKnown RBP11.95□□□□□ -0.5
CLDN18-201ENST00000183605 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
CLDN18-201ENST00000183605 ZNF165P49910 485 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 TYRO3Q06418 890 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 GNL2Q13823 731 aaKnown RBP11.94□□□□□ -0.5
CLDN18-201ENST00000183605 ELF2Q15723 593 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
CLDN18-201ENST00000183605 ZNF215Q9UL58 517 aaPredicted RBP11.94□□□□□ -0.5
CLDN18-201ENST00000183605 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 CUL4AQ13619 759 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 LAMC1P11047 1609 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 ANAPC15P60006 121 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
CLDN18-201ENST00000183605 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
CLDN18-201ENST00000183605 TFIP11Q9UBB9 837 aaKnown RBP11.94□□□□□ -0.5
CLDN18-201ENST00000183605 DEPDC5O75140 1603 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 GJB2P29033 226 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 BMS1Q14692 1282 aaKnown RBP11.93□□□□□ -0.5
CLDN18-201ENST00000183605 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 TSPYL1Q9H0U9 437 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 F6X3S4 739 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 SOX12O15370 315 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 CASTP20810 708 aaKnown RBP11.93□□□□□ -0.5
CLDN18-201ENST00000183605 SLFN14P0C7P3 912 aa11.93□□□□□ -0.5
CLDN18-201ENST00000183605 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
CLDN18-201ENST00000183605 ABCC4O15439 1325 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 FYB1O15117 783 aa11.92□□□□□ -0.5
CLDN18-201ENST00000183605 CTIFO43310 598 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms