RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HAUS7Q99871 368 aa4□□□□□ -1.77
NEB-201ENST00000172853 PRDM11Q9NQV5 511 aa4□□□□□ -1.77
NEB-201ENST00000172853 CCDC96Q2M329 555 aa4□□□□□ -1.77
NEB-201ENST00000172853 MSANTD4Q8NCY6 345 aa4□□□□□ -1.77
NEB-201ENST00000172853 DDX54Q8TDD1 881 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 BICD1Q96G01 975 aa4□□□□□ -1.77
NEB-201ENST00000172853 UBTFL1P0CB47 393 aaPredicted RBP4□□□□□ -1.77
NEB-201ENST00000172853 CERS3Q8IU89 383 aa4□□□□□ -1.77
NEB-201ENST00000172853 CKAP2LQ8IYA6 745 aa4□□□□□ -1.77
NEB-201ENST00000172853 LRP2BPQ9P2M1 347 aa4□□□□□ -1.77
NEB-201ENST00000172853 STK24Q9Y6E0 443 aa4□□□□□ -1.77
NEB-201ENST00000172853 TDO2P48775 406 aa4□□□□□ -1.77
NEB-201ENST00000172853 LRRC27Q9C0I9 530 aa4□□□□□ -1.77
NEB-201ENST00000172853 SAMM50Q9Y512 469 aa4□□□□□ -1.77
NEB-201ENST00000172853 LETM1O95202 739 aaPredicted RBP4□□□□□ -1.77
NEB-201ENST00000172853 CCDC6Q16204 474 aa4□□□□□ -1.77
NEB-201ENST00000172853 PPP1R14CQ8TAE6 165 aa4□□□□□ -1.77
NEB-201ENST00000172853 ANKIB1Q9P2G1 1089 aa4□□□□□ -1.77
NEB-201ENST00000172853 DIAPH1O60610 1272 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 KINO60870 393 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 ANKLE2Q86XL3 938 aa4□□□□□ -1.77
NEB-201ENST00000172853 CABP2Q9NPB3 220 aa4□□□□□ -1.77
NEB-201ENST00000172853 EIF3DO15371 548 aaKnown RBP eCLIP4□□□□□ -1.77
NEB-201ENST00000172853 LIG1P18858 919 aa4□□□□□ -1.77
NEB-201ENST00000172853 DAAM2Q86T65 1068 aa4□□□□□ -1.77
NEB-201ENST00000172853 TCIRG1Q13488 830 aa4□□□□□ -1.77
NEB-201ENST00000172853 UTP14CQ5TAP6 766 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 CCDC174Q6PII3 467 aa4□□□□□ -1.77
NEB-201ENST00000172853 EEA1Q15075 1411 aa4□□□□□ -1.77
NEB-201ENST00000172853 SYNCQ9H7C4 482 aa4□□□□□ -1.77
NEB-201ENST00000172853 KDM4AO75164 1064 aa4□□□□□ -1.77
NEB-201ENST00000172853 MAP7D1Q3KQU3 841 aa4□□□□□ -1.77
NEB-201ENST00000172853 PSPC1Q8WXF1 523 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 ITM2BQ9Y287 266 aa4□□□□□ -1.77
NEB-201ENST00000172853 DDX49Q9Y6V7 483 aaKnown RBP4□□□□□ -1.77
NEB-201ENST00000172853 RAB3IPQ96QF0 476 aaPredicted RBP4□□□□□ -1.77
NEB-201ENST00000172853 ANAPC4Q9UJX5 808 aa4□□□□□ -1.77
NEB-201ENST00000172853 FKBP15Q5T1M5 1219 aa4□□□□□ -1.77
NEB-201ENST00000172853 CENPHQ9H3R5 247 aa4□□□□□ -1.77
NEB-201ENST00000172853 DHX57Q6P158 1386 aaKnown RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 GNAI1P63096 354 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 OGFOD1Q8N543 542 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 EIF5P55010 431 aaKnown RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 ZNF219Q9P2Y4 722 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 C16orf72Q14CZ0 275 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 FOXD4L6Q3SYB3 417 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 FOXD4L3Q6VB84 417 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 WDR63Q8IWG1 891 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CCDC30Q5VVM6 783 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 MIA2Q96PC5 1412 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 HACE1Q8IYU2 909 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 RTEL1Q9NZ71 1219 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 FAM8A1Q9UBU6 413 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 C6orf229H3BNL8 230 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 MAP4K4O95819 1239 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 GNAI3P08754 354 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 NUP133Q8WUM0 1156 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 LEO1Q8WVC0 666 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 JDP2Q8WYK2 163 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 UBAP1LF5GYI3 381 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 NR1I2O75469 434 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CCDC178Q5BJE1 867 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 DYNC1I1O14576 645 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 SMC1BQ8NDV3 1235 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 SHTN1A0MZ66 631 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CASTP20810 708 aaKnown RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 STK38Q15208 465 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 TCHPQ9BT92 498 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 SLC5A4Q9NY91 659 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CFAP45Q9UL16 551 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 NLRP5P59047 1200 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 ANKRD1Q15327 319 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CCDC172P0C7W6 258 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 IMMTQ16891 758 aaKnown RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 OTUD7BQ6GQQ9 843 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 IFT57Q9NWB7 429 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CCDC12Q8WUD4 166 aaPredicted RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 KRT23Q9C075 422 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 M0QZ92 97 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 MAP3K11Q16584 847 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 NBPF3Q9H094 633 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 NOL3O60936 208 aaKnown RBP3.99□□□□□ -1.77
NEB-201ENST00000172853 USP8P40818 1118 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 CACNA2D4Q7Z3S7 1137 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 HOOK2Q96ED9 719 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 RCAN3Q9UKA8 241 aa3.99□□□□□ -1.77
NEB-201ENST00000172853 RFC4P35249 363 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 RBM25P49756 843 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 BAG3O95817 575 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 SMTNL1A8MU46 457 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PDCP20941 246 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PKD2Q13563 968 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 PFDN4Q9NQP4 134 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 ELL2O00472 640 aaPredicted RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 NFKBIBQ15653 356 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 DDX46Q7L014 1031 aaKnown RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 SERPINC1P01008 464 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 MUM1L1Q5H9M0 696 aa3.98□□□□□ -1.77
NEB-201ENST00000172853 SPTY2D1Q68D10 685 aaPredicted RBP3.98□□□□□ -1.77
NEB-201ENST00000172853 GIMAP7Q8NHV1 300 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms