RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CARD14Q9BXL6 1004 aa14.6□□□□□ -0.07
TSPAN9-201ENST00000011898 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 CWC15Q9P013 229 aaKnown RBP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 ADGRB2O60241 1585 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 NUTM2BA6NNL0 878 aaPredicted RBP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 NUTM2EB1AL46 878 aaPredicted RBP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 NUTM2AQ8IVF1 878 aaPredicted RBP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 RNF123Q5XPI4 1314 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 EDC4Q6P2E9 1401 aaKnown RBP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 NFE2L2Q16236 605 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 TAF7LQ5H9L4 462 aa14.59□□□□□ -0.07
TSPAN9-201ENST00000011898 ZKSCAN1P17029 563 aaPredicted RBP14.58□□□□□ -0.07
TSPAN9-201ENST00000011898 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
TSPAN9-201ENST00000011898 PCDHB15Q9Y5E8 787 aa14.58□□□□□ -0.08
TSPAN9-201ENST00000011898 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
TSPAN9-201ENST00000011898 GNAI3P08754 354 aa14.58□□□□□ -0.08
TSPAN9-201ENST00000011898 UBTFL1P0CB47 393 aaPredicted RBP14.58□□□□□ -0.08
TSPAN9-201ENST00000011898 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
TSPAN9-201ENST00000011898 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
TSPAN9-201ENST00000011898 NWD1Q149M9 1564 aa14.57□□□□□ -0.08
TSPAN9-201ENST00000011898 IGSF3O75054 1194 aa14.57□□□□□ -0.08
TSPAN9-201ENST00000011898 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 SURF6O75683 361 aaKnown RBP14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 CDC42BPGQ6DT37 1551 aa14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 GOLGA6L19H0YKK7 550 aa14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 TTC21BQ7Z4L5 1316 aa14.56□□□□□ -0.08
TSPAN9-201ENST00000011898 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 SASS6Q6UVJ0 657 aa14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 ABTB2Q8N961 1025 aa14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 SPINK5Q9NQ38 1064 aaPredicted RBP14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 NEXNQ0ZGT2 675 aa14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 PPP4R3BQ5MIZ7 849 aa14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 CCDC30Q5VVM6 783 aa14.55□□□□□ -0.08
TSPAN9-201ENST00000011898 BECN2A8MW95 431 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 GNAI2P04899 355 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 DCTN1Q14203 1278 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 NME9Q86XW9 330 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 GAS2L2Q8NHY3 880 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 SMC3Q9UQE7 1217 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 DCCP43146 1447 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 FOXO3O43524 673 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 ALDH1L2Q3SY69 923 aa14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 CIZ1Q9ULV3 898 aaPredicted RBP14.54□□□□□ -0.08
TSPAN9-201ENST00000011898 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 FYB1O15117 783 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 HSP90AB4PQ58FF6 505 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 NPHP3Q7Z494 1330 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 KLHL34Q8N239 644 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 DEF6Q9H4E7 631 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 SKIDA1Q1XH10 827 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 TBC1D32Q96NH3 1257 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 MYOM1P52179 1685 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 ITSN1Q15811 1721 aa14.53□□□□□ -0.08
TSPAN9-201ENST00000011898 H3BQV1 296 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 IFFO2Q5TF58 517 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 GPATCH11Q8N954 259 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 KRT28Q7Z3Y7 464 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 FAM184AQ8NB25 1140 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 MNS1Q8NEH6 495 aa14.52□□□□□ -0.08
TSPAN9-201ENST00000011898 RPAP2Q8IXW5 612 aaPredicted RBP14.52□□□□□ -0.09
TSPAN9-201ENST00000011898 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
TSPAN9-201ENST00000011898 ERC2O15083 957 aa14.52□□□□□ -0.09
TSPAN9-201ENST00000011898 RBM25P49756 843 aaKnown RBP14.52□□□□□ -0.09
TSPAN9-201ENST00000011898 DYNC1I1O14576 645 aa14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 TPD52L1Q16890 204 aaPredicted RBP14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 USP6P35125 1406 aa14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 SYTL4Q96C24 671 aaPredicted RBP14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 CALCOCO1Q9P1Z2 691 aa14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
TSPAN9-201ENST00000011898 H0YHG0 523 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 MCM2P49736 904 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 SPC24Q8NBT2 197 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 RLBP1P12271 317 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 CCT4P50991 539 aaKnown RBP14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 SF3A1Q15459 793 aaKnown RBP14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 FBLN1P23142 703 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 TPM4P67936 248 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 CCDC112Q8NEF3 446 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 SLAIN2Q9P270 581 aa14.5□□□□□ -0.09
TSPAN9-201ENST00000011898 AIMP1Q12904 312 aaKnown RBP14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 CWC22Q9HCG8 908 aaKnown RBP14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 MBD3O95983 291 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 RNF20Q5VTR2 975 aa14.49□□□□□ -0.09
TSPAN9-201ENST00000011898 LRRCC1Q9C099 1032 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms