RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 Oxsr1Q6P9R2 527 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Mrps27Q8BK72 415 aaKnown RBP10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Kif13aQ9EQW7 1749 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Arhgap4B1AUY3 965 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Vwa3bJ9JI28 736 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Zfp51Q3U4L8 781 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Tmco5bQ80X59 307 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Aldh8a1Q8BH00 487 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Mmel1Q9JLI3 765 aa10.47□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Nsd3Q6P2L6 1439 aa10.46□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Ankrd44B2RXR6 993 aa10.46□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Q3UPC7 1272 aa10.46□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Taf3Q5HZG4 932 aa10.46□□□□□ -0.73
Pdgfra-208ENSMUST00000202681 Adamtsl3G3UXC7 1706 aa10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ino80Q6ZPV2 1559 aa10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Tpd52l1O54818 204 aa10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Tpm3P21107 285 aaKnown RBP10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Eif4g2Q62448 906 aaKnown RBP10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Zkscan5Q9Z1D8 819 aa10.46□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Pik3r4Q8VD65 1358 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Card6E9PWH2 1175 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 RdxP26043 583 aaKnown RBP10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Gcc1Q9D4H2 778 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Zkscan16A2ALW2 728 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ess2O70279 479 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cpa2Q504N0 417 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 St18Q80TY4 1045 aa10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Utp3Q9JI13 469 aaKnown RBP10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 AatfQ9JKX4 526 aaKnown RBP10.45□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 CebpzP53569 1052 aaKnown RBP10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Tshz1Q5DTH5 1084 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Nol11Q8BJW5 723 aaKnown RBP10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ulbp1Q8HWA3 334 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Irx2P81066 474 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Rgl2Q61193 778 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Zfp397Q7TNK4 527 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ciz1Q8VEH2 845 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Rtf1A2AQ19 715 aaKnown RBP10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Mcm2P97310 904 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Plekhm2Q80TQ5 1018 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 RbsnQ80Y56 783 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 IqubQ8CDK3 788 aa10.44□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Uhrf1bp1B2KF50 1429 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cavin4A2AMM0 362 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ica1lQ3TY65 431 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Filip1lQ6P6L0 1131 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ccdc96Q9CR92 584 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cep170bQ80U49 1574 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 NinlQ6ZQ12 1394 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 PaskQ8CEE6 1383 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Efcab6Q6P1E8 1516 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 NmiO35309 314 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Pcmtd1P59913 357 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 CenpqQ9CPQ5 267 aa10.43□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Arhgap23Q69ZH9 1483 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cdk5rap2Q8K389 1822 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Zfp597E9Q6S0 419 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cfap73J3QPZ5 306 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Phf20l1Q8CCJ9 1013 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ccar2Q8VDP4 922 aaKnown RBP10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 HnrnpuQ8VEK3 800 aaKnown RBP10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 FanclQ9CR14 375 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Spock2Q9ER58 423 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Rims1Q99NE5 1463 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Cspp1B2RX88 1205 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Atp6v1dP57746 247 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Psme1P97371 249 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Q4VA45 678 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Utp14aQ640M1 767 aaKnown RBP10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Erc2Q6PH08 957 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Rab3gap1Q80UJ7 981 aa10.42□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Mroh1E0CZ22 1640 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Dnajc2P54103 621 aaKnown RBP10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Samm50Q8BGH2 469 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Lrrc7Q80TE7 1490 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Dip2aQ8BWT5 1523 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Kif2aP28740 705 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Rnf123Q5XPI3 1314 aa10.41□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Zscan29E9Q5B4 869 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ms4a1P19437 291 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ccdc162pQ0VG85 912 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Nlrp3Q8R4B8 1033 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Med4Q9CQA5 270 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 LlphQ9D945 130 aaKnown RBP10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 RictorQ6QI06 1708 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 DnmbpQ6TXD4 1580 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 4930407I10RikD3Z5T8 1512 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Mum1Q6DID5 682 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Nop14Q8R3N1 860 aaKnown RBP10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Pcdhgc5Q91XW9 944 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Ifi35Q9D8C4 286 aa10.4□□□□□ -0.74
Pdgfra-208ENSMUST00000202681 Brpf3B2KF05 1204 aaKnown RBP10.4□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Cdk4P30285 303 aa10.4□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Zscan22Q8BGS5 496 aa10.4□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 AnlnQ8K298 1121 aaKnown RBP10.4□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Q9D2X8 372 aa10.4□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Itsn1Q9Z0R4 1714 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Klhl34A2AI76 644 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Cfap157Q0VFX2 523 aa10.39□□□□□ -0.75
Pdgfra-208ENSMUST00000202681 Naa30Q8CES0 364 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms