RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Slc26a8Q8R0C3 999 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 NinlQ6ZQ12 1394 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Anapc15-psA0A140T8L6 141 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Trim27Q62158 513 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ift57Q8BXG3 429 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Abca5Q8K448 1642 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Adcy5P84309 1262 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Lmtk2Q3TYD6 1471 aa10.81□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Irgm2A0A140LIF8 407 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Tax1bp1Q3UKC1 814 aaKnown RBP10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Spty2d1Q68FG3 682 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ell2Q3UKU1 639 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Prpf4bQ61136 1007 aaKnown RBP10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Odf2lQ9D478 642 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cfap58B2RW38 873 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Kif21bQ9QXL1 1668 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Lrrc9Q8CDN9 1456 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Rnf216P58283 853 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 EappQ5BU09 281 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Rlbp1Q9Z275 317 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Fam184aE9PW83 1143 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Brd1E9PZ26 1189 aaKnown RBP10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cct4P80315 539 aaKnown RBP10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Agtpbp1Q641K1 1218 aa10.8□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ccne1Q61457 408 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ccdc66Q6NS45 935 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Frat2Q8K025 231 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 ZwintQ9CQU5 252 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cwc15Q9JHS9 229 aaKnown RBP10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Il4rP16382 810 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Rbm28Q8CGC6 750 aaKnown RBP10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ppfia3P60469 1194 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Slu7Q8BHJ9 585 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Pms1Q8K119 917 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 SelenooQ9DBC0 667 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Il1rapl2Q9ERS6 686 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cpsf1Q9EPU4 1441 aaKnown RBP10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Eif3aP23116 1344 aaKnown RBP10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Evi5lH3BKQ3 813 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Hvcn1Q3U2S8 269 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Paip2Q9D6V8 124 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ipo7Q9EPL8 1038 aaKnown RBP10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 CenphQ9QYM8 241 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Washc4Q3UMB9 1173 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 SlmapQ3URD3 845 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ppp6r1Q7TSI3 856 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Def6Q8C2K1 630 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Bloc1s4Q8VED2 215 aa10.79□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Wdr33Q8K4P0 1330 aaKnown RBP10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Disp1Q3TDN0 1521 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ttc19Q8CC21 365 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Golim4Q8BXA1 655 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Polr3dQ91WD1 398 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Cul7Q8VE73 1689 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Pde1cQ64338 706 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Tpd52l2Q9CYZ2 220 aaKnown RBP10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ppp1r3fQ9JIG4 799 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Pik3r4Q8VD65 1358 aa10.78□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Ccdc102aQ3TMW1 549 aa10.77□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Rrs1Q9CYH6 365 aaKnown RBP10.77□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Stx6Q9JKK1 255 aa10.77□□□□□ -0.68
Scn8a-213ENSMUST00000201549 Smg7Q5RJH6 1138 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Ltv1Q6NSQ7 470 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Arhgef18Q6P9R4 1021 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gm10093D3YYI8 482 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Hdac1O09106 482 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Pdia3P27773 505 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Dnajc2P54103 621 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Fam13aQ8BGI4 693 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gm21698A0A087WQP8 267 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gm21671G3UY31 267 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Brd2Q7JJ13 798 aaKnown RBP10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Tmco3Q8BH01 678 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Q3UJC8 639 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Fam50bQ9WTJ8 334 aa10.77□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Map3k7clP58500 142 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Bag1Q60739 355 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Rhot2Q8JZN7 620 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Shroom2A2ALU4 1481 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Cavin1O54724 392 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Chpf2Q3UU43 768 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Rufy2Q8R4C2 606 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gdpd2Q9ESM6 539 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 OvosQ3UU35 1456 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Abcc6Q9R1S7 1498 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 PaskQ8CEE6 1383 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Ccdc155Q80VJ8 648 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Ddx19aQ61655 478 aaKnown RBP10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Stard3nlQ9DCI3 235 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Bank1Q80VH0 783 aa10.76□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Atp2b1G5E829 1220 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 F2rP30558 430 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Cct2P80314 535 aaKnown RBP10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Trim25Q61510 634 aaKnown RBP10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gnl2Q99LH1 728 aaKnown RBP10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Speer4bQ9D9F7 267 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Sel1lQ9Z2G6 790 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Slc13a4Q8BZ82 625 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gm21663A0A0G2JE01 267 aa10.75□□□□□ -0.69
Scn8a-213ENSMUST00000201549 Gm7361D3Z6R1 267 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms