RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Agtpbp1Q641K1 1218 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Bsdc1Q80Y55 427 aa13□□□□□ -0.33
Msh3-202ENSMUST00000185852 Astn2Q80Z10 1352 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Zbtb21E9Q444 1094 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 St18Q80TY4 1045 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Abca6Q8K441 1624 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Gcc1Q9D4H2 778 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Irx3P81067 507 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ifit1bl2Q3U687 466 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Larp1Q6ZQ58 1072 aaKnown RBP12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ppip5k2Q6ZQB6 1129 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ccp110Q7TSH4 1004 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Adgrl1Q80TR1 1466 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Abca8bQ8K440 1620 aa12.99□□□□□ -0.33
Msh3-202ENSMUST00000185852 Tbc1d9Q3UYK3 1264 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Trim34bJ3QNR8 485 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ddx46Q569Z5 1032 aaKnown RBP12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Rbm26Q6NZN0 1012 aaKnown RBP12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Ccdc9Q8VC31 543 aaKnown RBP12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Bicc1Q99MQ1 977 aaKnown RBP12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Smc3Q9CW03 1217 aaKnown RBP12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Cyp7a1Q64505 503 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Nsd3Q6P2L6 1439 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Pof1bQ8K4L4 587 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 Gm32742A0A1B0GT42 1604 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 AnkarA2RT91 1465 aa12.98□□□□□ -0.33
Msh3-202ENSMUST00000185852 MpndQ3TV65 487 aa12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Rnf214Q8BFU3 668 aaKnown RBP12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Uggt2E9Q4X2 1504 aa12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Dip2cE9PWR4 1557 aa12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Trim28Q62318 834 aa12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Echdc1Q9D9V3 322 aa12.97□□□□□ -0.33
Msh3-202ENSMUST00000185852 Asic4Q7TNS7 539 aa12.96□□□□□ -0.33
Msh3-202ENSMUST00000185852 Usp19Q3UJD6 1360 aa12.96□□□□□ -0.33
Msh3-202ENSMUST00000185852 Rbm33Q9CXK9 1231 aaKnown RBP12.96□□□□□ -0.33
Msh3-202ENSMUST00000185852 Pdzd9Q9D9M4 266 aa12.96□□□□□ -0.33
Msh3-202ENSMUST00000185852 SfswapQ3USH5 945 aaKnown RBP12.96□□□□□ -0.34
Msh3-202ENSMUST00000185852 SympkQ80X82 1284 aa12.96□□□□□ -0.34
Msh3-202ENSMUST00000185852 Top1mtQ8R4U6 593 aa12.96□□□□□ -0.34
Msh3-202ENSMUST00000185852 Anxa1P10107 346 aaKnown RBP12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Gprasp1Q5U4C1 1347 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Rnf20Q5DTM8 973 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Hand2Q61039 217 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Golim4Q8BXA1 655 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Kif21bQ9QXL1 1668 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Smarcc1P97496 1104 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Gtf3c3Q3TMP1 882 aa12.95□□□□□ -0.34
Msh3-202ENSMUST00000185852 Smarce1O54941 411 aaKnown RBP12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Tnni2P13412 182 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Kcna6Q61923 529 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Spty2d1Q68FG3 682 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 RgmbQ7TQ33 436 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Phkg2Q9DB30 406 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Wdr63B2RY71 923 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Mcm2P97310 904 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Cdc42bpbQ7TT50 1713 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Atp6v1dP57746 247 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Mre11Q61216 706 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Rab3gap1Q80UJ7 981 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Sgsm1Q8BPQ7 1093 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Pet2A2AHY8 747 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Grm8P47743 908 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ankrd13dQ6PD24 605 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Msl1Q6PDM1 616 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Q9D9S1 216 aa12.94□□□□□ -0.34
Msh3-202ENSMUST00000185852 Rbm28Q8CGC6 750 aaKnown RBP12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Bag3Q9JLV1 577 aaKnown RBP12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Taf7Q9R1C0 341 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Tex14Q7M6U3 1450 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Dctn1O08788 1281 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Timm10P62073 90 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Dhx38Q80X98 1228 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Rbm19Q8R3C6 952 aaKnown RBP12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Kif24Q6NWW5 1356 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 VgfQ0VGU4 617 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 KinQ8K339 391 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ttc21aQ8C0S4 1314 aa12.93□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ttll7A4Q9F0 912 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Me1P06801 572 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Eif3aP23116 1344 aaKnown RBP12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ets1P27577 440 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Nkx1-2P42580 305 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 CpvlQ9D3S9 478 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Tbc1d8Q9Z1A9 1134 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Mbd5B1AYB6 1498 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ankle2Q6P1H6 964 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Cwc25Q9DBF7 416 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Sptbn5F6UCX4 1208 aa12.92□□□□□ -0.34
Msh3-202ENSMUST00000185852 Fhod3Q76LL6 1578 aa12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Bicd2Q921C5 820 aa12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Cplx1P63040 134 aa12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Ddx58Q6Q899 926 aa12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Hnrnpul1Q8VDM6 859 aaKnown RBP12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Trpm2Q91YD4 1506 aa12.91□□□□□ -0.34
Msh3-202ENSMUST00000185852 Cep170bQ80U49 1574 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 Card10P58660 1021 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 Adamts13Q769J6 1426 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 Knl1Q66JQ7 1612 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 Irgm2A0A140LIF8 407 aa12.9□□□□□ -0.34
Msh3-202ENSMUST00000185852 Lmod1Q8BVA4 595 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms