RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Pdcl3Q8BVF2 240 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ubxn4Q8VCH8 506 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ush1cQ9ES64 910 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Izumo3A6PWV3 263 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Abcc5Q9R1X5 1436 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Stk38Q91VJ4 465 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Olr1Q9EQ09 363 aa13.42□□□□□ -0.26
Chd3-202ENSMUST00000108661 Gcc1Q9D4H2 778 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Nol7Q9D7Z3 254 aaKnown RBP13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Slc26a8Q8R0C3 999 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Speer4dL7N216 212 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Stim1P70302 685 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Fsd1Q7TPM6 496 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Babam1Q3UI43 333 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Matr3Q8K310 846 aaKnown RBP13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ankle2Q6P1H6 964 aa13.41□□□□□ -0.26
Chd3-202ENSMUST00000108661 Mrvi1Q9WUX5 899 aaKnown RBP13.4□□□□□ -0.26
Chd3-202ENSMUST00000108661 Ces1hD3Z298 562 aa13.4□□□□□ -0.26
Chd3-202ENSMUST00000108661 Kif4P33174 1231 aa13.4□□□□□ -0.26
Chd3-202ENSMUST00000108661 Plekho1Q9JIY0 408 aa13.4□□□□□ -0.26
Chd3-202ENSMUST00000108661 Asxl1P59598 1514 aa13.4□□□□□ -0.26
Chd3-202ENSMUST00000108661 Adgrl3Q80TS3 1537 aa13.4□□□□□ -0.27
Chd3-202ENSMUST00000108661 Prpf4bQ61136 1007 aaKnown RBP13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Palm3A2TJV2 734 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Cers3Q1A3B0 383 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ak7Q9D2H2 614 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Cdan1Q8CC12 1239 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ccdc172Q810N9 267 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Tango6Q8C3S2 1079 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Wasf1Q8R5H6 559 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ccdc39Q9D5Y1 937 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Gnat3Q3V3I2 354 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Map3k2Q61083 619 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Pms1Q8K119 917 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Sos1Q62245 1319 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Nphp3Q7TNH6 1325 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Taf3Q5HZG4 932 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Tubb6Q922F4 447 aa13.39□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ercc6lQ8BHK9 1240 aa13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Mrpl12Q9DB15 201 aaKnown RBP13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ptcd1Q8C2E4 695 aaKnown RBP13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Sde2Q8K1J5 448 aaKnown RBP13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 KarsQ99MN1 595 aaKnown RBP13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Pet2A2AHY8 747 aa13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Cct4P80315 539 aaKnown RBP13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Atp2b4Q6Q477 1205 aa13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Tbc1d7Q9D0K0 293 aa13.38□□□□□ -0.27
Chd3-202ENSMUST00000108661 Kank1E9Q238 1360 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Fam13aQ8BGI4 693 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Gripap1Q8VD04 806 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Rabep1O35551 862 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Taok3Q8BYC6 898 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 NpatQ8BMA5 1420 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Cacna2d4Q5RJF7 1116 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Gigyf1Q99MR1 1044 aaKnown RBP13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Psrc1Q9D0P7 329 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Cdc45Q9Z1X9 566 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Jakmip1Q8BVL9 626 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Znf518aB2RRF6 1478 aaKnown RBP13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Hmgn5Q9JL35 406 aa13.37□□□□□ -0.27
Chd3-202ENSMUST00000108661 Prex2Q3LAC4 1598 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Brf1Q8CFK2 676 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Pip4k2aO70172 405 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Rufy1Q8BIJ7 712 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Slain2Q8CI08 581 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 MvpQ9EQK5 861 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Rufy2Q8R4C2 606 aa13.36□□□□□ -0.27
Chd3-202ENSMUST00000108661 Rbm17Q8JZX4 405 aaKnown RBP13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Dnajc10Q9DC23 793 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ccdc34Q3UI66 367 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 SelenooQ9DBC0 667 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Eno4Q8C042 619 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Amotl2Q8K371 772 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Irgm2A0A140LIF8 407 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Ssr1Q9CY50 286 aaKnown RBP13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Fam13bQ8K2H3 851 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Tut1Q8R3F9 869 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Lmbr1Q9JIT0 490 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Mcm10Q0VBD2 885 aa13.35□□□□□ -0.27
Chd3-202ENSMUST00000108661 Chpf2Q3UU43 768 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Tom1l2Q5SRX1 507 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Zranb1Q7M760 708 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Bag3Q9JLV1 577 aaKnown RBP13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Hs6st3Q9QYK4 470 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Pm20d1Q8C165 503 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Fam135aQ6NS59 1506 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Eif6O55135 245 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Kcnj4P52189 445 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Top1mtQ8R4U6 593 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Rnf41Q8BH75 317 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Iqca1Q9CUL5 857 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Slc12a5Q91V14 1138 aa13.34□□□□□ -0.27
Chd3-202ENSMUST00000108661 Xrcc4Q924T3 326 aa13.33□□□□□ -0.27
Chd3-202ENSMUST00000108661 Naip5Q9R016 1403 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Ptpdc1Q6NZK8 747 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Tmem87bQ8BKU8 555 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Sh3tc1G3X9F6 1346 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Traf3ip1Q149C2 625 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Lrrc43Q3V0L5 667 aa13.33□□□□□ -0.28
Chd3-202ENSMUST00000108661 Cep55Q8BT07 462 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 140.1 ms