RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Smc2Q8CG48 1191 aaKnown RBP8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Kri1Q8VDQ9 704 aaKnown RBP8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 MvpQ9EQK5 861 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Zkscan5Q9Z1D8 819 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Duxf3A0A0N4SV92 674 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ptgs1P22437 602 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ercc3P49135 783 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Fam107bQ3TGF2 131 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Zpr1Q62384 459 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ccdc66Q6NS45 935 aa8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Larp1Q6ZQ58 1072 aaKnown RBP8.27□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Me1P06801 572 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gjb2Q00977 226 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ppm1eQ80TL0 749 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Top1mtQ8R4U6 593 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ca8P28651 291 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Pnpla2Q8BJ56 486 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gnai2P08752 355 aaKnown RBP8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Atf3Q60765 181 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ncoa1P70365 1447 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 PrxO55103 1391 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Wdr63B2RY71 923 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Cfap157Q0VFX2 523 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Hs1bp3Q3TC93 395 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Cwc27Q3TKY6 469 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Tmx4Q8C0L0 335 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 TatQ8QZR1 454 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Chmp7Q8R1T1 451 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Stx6Q9JKK1 255 aa8.26□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Prex2Q3LAC4 1598 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Abcc1O35379 1528 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Aplp1Q03157 653 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Sycp1Q62209 993 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Anp32cQ64G17 123 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ptpdc1Q6NZK8 747 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ano6Q6P9J9 911 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ddx27Q921N6 760 aaKnown RBP8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 GphnQ8BUV3 769 aaKnown RBP8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Fbxo3Q9DC63 480 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Bin1O08539 588 aaKnown RBP8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gm156Q58A37 223 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Srgap3Q812A2 1099 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Cdk19Q8BWD8 501 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Fam76aQ922G2 307 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 4930548H24RikQ9D496 437 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Znf704Q9ERQ3 566 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Cfap74Q3UY96 1578 aa8.25□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gm3409A0A0G2JE67 319 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 EappQ5BU09 281 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 RalylQ8BTF8 293 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ccdc186Q8C9S4 917 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Tshz3Q8CGV9 1081 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ccdc12Q8R344 166 aaKnown RBP8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Lmtk2Q3TYD6 1471 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Camsap2Q8C1B1 1461 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 IbtkQ6ZPR6 1352 aaKnown RBP8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Brd1E9PZ26 1189 aaKnown RBP8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Oas2E9Q9A9 742 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Frat1P70339 274 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Tspyl3Q3UYP3 334 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ddx19aQ61655 478 aaKnown RBP8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Synpo2Q91YE8 1087 aaKnown RBP8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Tex19.1Q99MV2 351 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Golga5Q9QYE6 729 aa8.24□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gapvd1Q6PAR5 1458 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Wdr7Q920I9 1489 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Fsd1Q7TPM6 496 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Luzp1Q8R4U7 1068 aaKnown RBP8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gdpd2Q9ESM6 539 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Syt10Q9R0N4 523 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 IncenpQ9WU62 880 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Trappc8E9PWG2 1437 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gm21671G3UY31 267 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 TxlnbQ8VBT1 685 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Tubb6Q922F4 447 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Rusc2Q80U22 1514 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Zscan25B2RX31 543 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Strn4P58404 760 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Dnajc5P60904 198 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Abcf1Q6P542 837 aaKnown RBP8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ddx58Q6Q899 926 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Trim29Q8R2Q0 587 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Stxbp4Q9WV89 557 aa8.23□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Kdm5bQ80Y84 1544 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ttll12Q3UDE2 639 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 March6Q6ZQ89 909 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Smc4Q8CG47 1286 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Gimap6Q8K349 305 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ppp4r3bQ922R5 820 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Arhgef12Q8R4H2 1543 aaKnown RBP8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Btn2a2A4QPC6 514 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Capn2O08529 700 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ccdc158Q8CDI6 1109 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Rbm28Q8CGC6 750 aaKnown RBP8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 HypkQ9CR41 129 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 SarnpQ9D1J3 210 aaKnown RBP8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Akap8Q9DBR0 687 aaKnown RBP8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Ripk4Q9ERK0 786 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Igbp1bQ9QZ29 343 aa8.22□□□□□ -1.09
Smc1a-201ENSMUST00000045312 Atp7aQ64430 1491 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms