RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 ErmnQ5EBJ4 281 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Dnajc10Q9DC23 793 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Adgrl2Q8JZZ7 1487 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Pnmal2G3X9N3 661 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Mcm10Q0VBD2 885 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Gnat3Q3V3I2 354 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Gimap8Q75N62 688 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Ubxn4Q8VCH8 506 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Ccdc96Q9CR92 584 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Gtf3c6Q9D8P7 227 aa8.86□□□□□ -0.99
Usp40-201ENSMUST00000040783 Ncoa1P70365 1447 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Synj2Q9D2G5 1434 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Zranb1Q7M760 708 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Amotl2Q8K371 772 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Cog6Q8R3I3 657 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 NaspQ99MD9 773 aaKnown RBP8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Chaf1aQ9QWF0 911 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Fsd2Q8BZ52 692 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Atxn3Q9CVD2 355 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 PtprgQ05909 1442 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Astn2Q80Z10 1352 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Erbb3Q61526 1339 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Pdia4P08003 638 aaKnown RBP8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Cdkl5Q3UTQ8 938 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 AidaQ8C4Q6 305 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Ginm1Q91WR6 327 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Cwc25Q9DBF7 416 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 SfswapQ3USH5 945 aaKnown RBP8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Zc3h12cQ5DTV4 884 aa8.85□□□□□ -0.99
Usp40-201ENSMUST00000040783 Eif4g3Q80XI3 1579 aaKnown RBP8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Prkar2bP31324 416 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Spty2d1Q68FG3 682 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Nol12Q8BG17 217 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Tmem87bQ8BKU8 555 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Amotl1Q9D4H4 968 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Zscan20B2KFW1 1030 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Cyp7a1Q64505 503 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Slain2Q8CI08 581 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Ppp1r42Q8R1Z4 357 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Rapgef3Q8VCC8 918 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Echdc1Q9D9V3 322 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Asxl2Q8BZ32 1370 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Pprc1Q6NZN1 1644 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Wdr78E9PYY5 807 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Map3k2Q61083 619 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Efcab2Q9CQ46 164 aa8.84□□□□□ -0.99
Usp40-201ENSMUST00000040783 Dnajc2P54103 621 aaKnown RBP8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Mctp2Q5RJH2 878 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Wwc1Q5SXA9 1104 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Necab1Q8BG18 352 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 St5Q924W7 1134 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 PdiltQ9DAN1 588 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 PaskQ8CEE6 1383 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Tex2Q6ZPJ0 1128 aaKnown RBP8.83□□□□□ -1
Usp40-201ENSMUST00000040783 GptQ8QZR5 496 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Tmc1Q8R4P5 757 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Hmgn5Q9JL35 406 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Bag3Q9JLV1 577 aaKnown RBP8.83□□□□□ -1
Usp40-201ENSMUST00000040783 PzpQ61838 1495 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Jdp2P97875 163 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Brf1Q8CFK2 676 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Hfm1D3Z4R1 1434 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Qtrt2B8ZXI1 415 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Fsd1Q7TPM6 496 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Stk38Q91VJ4 465 aa8.83□□□□□ -1
Usp40-201ENSMUST00000040783 Skap1Q3UUV5 355 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Slc14a2Q8R4T9 930 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Rai14Q9EP71 979 aaKnown RBP8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Plekho1Q9JIY0 408 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Znf18Q810A1 556 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Taf7Q9R1C0 341 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Ptch1Q61115 1434 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Irgm2A0A140LIF8 407 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Speer4dL7N216 212 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Q3UPC7 1272 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Vps37dQ810I0 261 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Ccdc178Q8CDV0 866 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Adcy10Q8C0T9 1614 aa8.82□□□□□ -1
Usp40-201ENSMUST00000040783 Cyp26c1B2RXA7 518 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Kcnj4P52189 445 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Def6Q8C2K1 630 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Nup133Q8R0G9 1155 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Izumo3A6PWV3 263 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Tnni2P13412 182 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Stk11ipQ3TAA7 1072 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Kdm3aQ6PCM1 1323 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Pms1Q8K119 917 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Wasf1Q8R5H6 559 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Polr3dQ91WD1 398 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Galntl5Q9D4M9 431 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 ParvgQ9ERD8 331 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Eif4a2P10630 407 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 NapbP28663 298 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 ThemisQ8BGW0 636 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 PalldQ9ET54 1408 aa8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Rrbp1Q99PL5 1605 aaKnown RBP8.81□□□□□ -1
Usp40-201ENSMUST00000040783 Ppp1r21Q3TDD9 780 aa8.8□□□□□ -1
Usp40-201ENSMUST00000040783 Zkscan1Q8BGS3 561 aaKnown RBP8.8□□□□□ -1
Usp40-201ENSMUST00000040783 Rsph6aQ8CDR2 708 aa8.8□□□□□ -1
Usp40-201ENSMUST00000040783 Cdc45Q9Z1X9 566 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms