RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Nip7Q9CXK8 180 aaKnown RBP10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 Atl3Q91YH5 541 aa10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 DroshaQ5HZJ0 1373 aaKnown RBP10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 Ssh1Q76I79 1042 aa10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 Gtf2a1Q99PM3 378 aa10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 PxdnQ3UQ28 1475 aa10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 Sil1Q9EPK6 465 aa10.34□□□□□ -0.75
Ttc28-201ENSMUST00000040111 Slx4Q6P1D7 1565 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Trim30cD3YVI9 513 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Smarcc1P97496 1104 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Znf131Q8K3J5 619 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 LratQ9JI60 231 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ppp1r15aP17564 657 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Nol11Q8BJW5 723 aaKnown RBP10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Exoc5Q3TPX4 708 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 1700010I14RikQ7TPG0 532 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Smim5Q8BT42 78 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Igf2bp2Q5SF07 592 aaKnown RBP10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ubxn4Q8VCH8 506 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Polr3dQ91WD1 398 aa10.33□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Gjb2Q00977 226 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Irf9Q61179 399 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Atp2b1G5E829 1220 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 AidaQ8C4Q6 305 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Gpatch8A2A6A1 1505 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Mapkbp1Q6NS57 1503 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Pdia4P08003 638 aaKnown RBP10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Trim29Q8R2Q0 587 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Tmem67Q8BR76 992 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Psma5Q9Z2U1 241 aaKnown RBP10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Atp7aQ64430 1491 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 CastP51125 788 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Necab1Q8BG18 352 aa10.32□□□□□ -0.76
Ttc28-201ENSMUST00000040111 CtcfQ61164 736 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Bin1O08539 588 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Prl7d1P04769 244 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Terf1P70371 421 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Mex3cQ05A36 652 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 SelenooQ9DBC0 667 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 ItpripQ3TNL8 555 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ddx46Q569Z5 1032 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ythdc2B2RR83 1445 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 CpvlQ9D3S9 478 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ccdc85cE9Q6B2 420 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Myl3P09542 204 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Mcm3P25206 812 aaKnown RBP10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 SynmQ70IV5 1561 aa10.31□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Aifm3Q3TY86 605 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Slc14a2Q8R4T9 930 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Wdr62Q3U3T8 1523 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Prkab2Q6PAM0 271 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Lonrf3Q9D4H7 753 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 PdcQ9QW08 244 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ppip5k2Q6ZQB6 1129 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Psrc1Q9D0P7 329 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Iqca1Q9CUL5 857 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Lmbr1lQ9D1E5 489 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Eif4a2P10630 407 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Idi2Q8BFZ6 227 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Phf14Q9D4H9 881 aa10.3□□□□□ -0.76
Ttc28-201ENSMUST00000040111 BC005561E9Q5E2 1589 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Erc1Q99MI1 1120 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 TnmdQ9EP64 317 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Gprasp1Q5U4C1 1347 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Gas2l3Q3UWW6 683 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ankrd13dQ6PD24 605 aa10.29□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Znf526Q8BI66 675 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Letm1Q9Z2I0 738 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Slc52a2Q9D8F3 450 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Bag3Q9JLV1 577 aaKnown RBP10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 AU019823E9PUQ3 292 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Fchsd2Q3USJ8 740 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Jmjd4Q8BFT6 427 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ccdc102aQ3TMW1 549 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 FanclQ9CR14 375 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Ppp4r3bQ922R5 820 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Syce3B5KM66 88 aa10.28□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Zhx1P70121 873 aa10.27□□□□□ -0.76
Ttc28-201ENSMUST00000040111 Pram1Q6BCL1 675 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Homer1Q9Z2Y3 366 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ankrd26Q811D2 1581 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gm7347D3YYI9 267 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Speer4aF8VPX6 267 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Nop14Q8R3N1 860 aaKnown RBP10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Kcnh5Q920E3 988 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Tom1O88746 492 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Eif5P59325 429 aaKnown RBP10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Samd9lQ69Z37 1561 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Prex2Q3LAC4 1598 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gbp4Q61107 620 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ccdc181Q80ZU5 509 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 UvssaQ9D479 717 aa10.27□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Nup88Q8CEC0 753 aaKnown RBP10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Duxf3A0A0N4SV92 674 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Sptbn5F6UCX4 1208 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Rab3gap1Q80UJ7 981 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Erlin2Q8BFZ9 340 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 OptnQ8K3K8 584 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Stx8O88983 236 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gsdma2Q32M21 443 aa10.26□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms