RNA–Protein interactions for RNA: ENSMUST00000032962.10

Cln3-201, Transcript of Battenin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cln3, Length 2,386 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-201ENSMUST00000032962 Ipo8Q7TMY7 1010 aa14.85□□□□□ -0.03
Cln3-201ENSMUST00000032962 PigbQ9JJQ0 542 aa14.85□□□□□ -0.03
Cln3-201ENSMUST00000032962 Nectin2P32507 530 aa14.85□□□□□ -0.03
Cln3-201ENSMUST00000032962 Eif2s2Q99L45 331 aaKnown RBP14.85□□□□□ -0.03
Cln3-201ENSMUST00000032962 Ak7Q9D2H2 614 aa14.85□□□□□ -0.03
Cln3-201ENSMUST00000032962 Btbd11Q6GQW0 1109 aa14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Tspyl2Q7TQI8 677 aa14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Fer1l6E0CZ42 1862 aa14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Arfgef2A2A5R2 1792 aa14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Elp1Q7TT37 1333 aaKnown RBP14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Mast2Q60592 1734 aa14.84□□□□□ -0.03
Cln3-201ENSMUST00000032962 Trim30dE9PWL0 497 aa14.83□□□□□ -0.03
Cln3-201ENSMUST00000032962 Tmc1Q8R4P5 757 aa14.83□□□□□ -0.03
Cln3-201ENSMUST00000032962 Fgd1P52734 960 aa14.83□□□□□ -0.04
Cln3-201ENSMUST00000032962 Eif3bQ8JZQ9 803 aaKnown RBP14.83□□□□□ -0.04
Cln3-201ENSMUST00000032962 Nup153E9Q3G8 1462 aaKnown RBP14.83□□□□□ -0.04
Cln3-201ENSMUST00000032962 Uhrf1bp1B2KF50 1429 aa14.82□□□□□ -0.04
Cln3-201ENSMUST00000032962 Kcnh4A2A5F7 1018 aa14.82□□□□□ -0.04
Cln3-201ENSMUST00000032962 Tns2Q8CGB6 1400 aa14.82□□□□□ -0.04
Cln3-201ENSMUST00000032962 Q8BT18 775 aa14.82□□□□□ -0.04
Cln3-201ENSMUST00000032962 Sos1Q62245 1319 aa14.82□□□□□ -0.04
Cln3-201ENSMUST00000032962 Hsp90ab1P11499 724 aaKnown RBP14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ankrd50F7BE84 1390 aa14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Cacna1sQ02789 1880 aa14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Fkbp4P30416 458 aa14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Taok3Q8BYC6 898 aa14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Cap2Q9CYT6 476 aa14.81□□□□□ -0.04
Cln3-201ENSMUST00000032962 Zfp777B9EKF4 885 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ppp1r9bQ6R891 817 aaKnown RBP14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ccdc60Q8C4J0 545 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Znf330Q922H9 316 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ccdc183A2AJB1 534 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Chpf2Q3UU43 768 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 4930567H17RikQ3V0K5 233 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Kiaa0319Q5SZV5 1081 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Tmco5bQ80X59 307 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Lrit1Q8K099 624 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ipo4Q8VI75 1082 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ppp1r3fQ9JIG4 799 aa14.8□□□□□ -0.04
Cln3-201ENSMUST00000032962 CastP51125 788 aa14.79□□□□□ -0.04
Cln3-201ENSMUST00000032962 Adgrb1Q3UHD1 1582 aa14.79□□□□□ -0.04
Cln3-201ENSMUST00000032962 Gnai1B2RSH2 354 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Rab11fip3Q8CHD8 1047 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ginm1Q91WR6 327 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Gnai3Q9DC51 354 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ttc21aQ8C0S4 1314 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Nutm1Q8BHP2 1126 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Nwd2Q6P5U7 1742 aa14.78□□□□□ -0.04
Cln3-201ENSMUST00000032962 Znf521Q6KAS7 1311 aa14.77□□□□□ -0.04
Cln3-201ENSMUST00000032962 Q3TQI7 289 aaKnown RBP14.77□□□□□ -0.04
Cln3-201ENSMUST00000032962 Pank1Q8K4K6 548 aa14.77□□□□□ -0.04
Cln3-201ENSMUST00000032962 Ppfibp2O35711 882 aa14.77□□□□□ -0.05
Cln3-201ENSMUST00000032962 Slc39a6Q8C145 765 aa14.77□□□□□ -0.05
Cln3-201ENSMUST00000032962 Tnks1bp1P58871 1720 aa14.76□□□□□ -0.05
Cln3-201ENSMUST00000032962 Efcab2Q9CQ46 164 aa14.76□□□□□ -0.05
Cln3-201ENSMUST00000032962 Pnpla7A2AJ88 1352 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Vamp4O70480 141 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Aifm3Q3TY86 605 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Prkab2Q6PAM0 271 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Slfnl1Q8BHW9 410 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Hspa2P17156 633 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Igfbp6P47880 238 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Eif4a1P60843 406 aaKnown RBP14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Ciz1Q8VEH2 845 aa14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Foxp4Q9DBY0 795 aaKnown RBP14.75□□□□□ -0.05
Cln3-201ENSMUST00000032962 Syde2E9PUP1 1314 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Bicdl1A0JNT9 577 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Cnnm1Q0GA42 951 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Rgs17Q9QZB0 210 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Trpm3Q5F4S9 1721 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Znf541Q0GGX2 1363 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Trim58Q5NCC9 485 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Ssfa2Q922B9 1252 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Atg3Q9CPX6 314 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Rlbp1Q9Z275 317 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Hdac6Q9Z2V5 1149 aa14.74□□□□□ -0.05
Cln3-201ENSMUST00000032962 Ccar1Q8CH18 1146 aaKnown RBP14.73□□□□□ -0.05
Cln3-201ENSMUST00000032962 Duxf3A0A0N4SV92 674 aa14.73□□□□□ -0.05
Cln3-201ENSMUST00000032962 Fam83gQ5SWY7 812 aa14.73□□□□□ -0.05
Cln3-201ENSMUST00000032962 4930523C07RikE9Q2T4 99 aa14.72□□□□□ -0.05
Cln3-201ENSMUST00000032962 Pdia6Q922R8 440 aaKnown RBP14.71□□□□□ -0.05
Cln3-201ENSMUST00000032962 Htatsf1Q8BGC0 757 aa14.71□□□□□ -0.05
Cln3-201ENSMUST00000032962 Miga2Q8BK03 593 aa14.71□□□□□ -0.05
Cln3-201ENSMUST00000032962 Crb1Q8VHS2 1405 aa14.71□□□□□ -0.05
Cln3-201ENSMUST00000032962 AampJ3QN89 436 aa14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 Smg7Q5RJH6 1138 aaKnown RBP14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 Dcaf5Q80T85 946 aa14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 GckrQ91X44 587 aa14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 Col4a1P02463 1669 aa14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 Klc3Q91W40 508 aa14.7□□□□□ -0.06
Cln3-201ENSMUST00000032962 GalcP54818 684 aa14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 Plekhm2Q80TQ5 1018 aa14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 UtrnE9Q6R7 3430 aa14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 G3bp1P97855 465 aaKnown RBP14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 KarsQ99MN1 595 aaKnown RBP14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 Abcc12Q80WJ6 1366 aa14.69□□□□□ -0.06
Cln3-201ENSMUST00000032962 Ttll7A4Q9F0 912 aa14.68□□□□□ -0.06
Cln3-201ENSMUST00000032962 Vps33bP59016 617 aa14.68□□□□□ -0.06
Cln3-201ENSMUST00000032962 Col1a2Q01149 1372 aa14.68□□□□□ -0.06
Cln3-201ENSMUST00000032962 Ppp2r3aB2RXC8 1150 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms