RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Zranb3Q6NZP1 1069 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Q8BT18 775 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 ZwintQ9CQU5 252 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 NefhP19246 1090 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Snap23O09044 210 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Eif4a2P10630 407 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Usp25P57080 1055 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Zbtb45Q52KG4 520 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Nol11Q8BJW5 723 aaKnown RBP14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ccdc47Q9D024 483 aaKnown RBP14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Kdm5cP41230 1554 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Asxl2Q8BZ32 1370 aa14.96□□□□□ -0.01
Msh6-201ENSMUST00000005503 Eif5P59325 429 aaKnown RBP14.96□□□□□ -0.02
Msh6-201ENSMUST00000005503 Scaf11E9PZM7 1456 aaKnown RBP14.96□□□□□ -0.02
Msh6-201ENSMUST00000005503 Elp1Q7TT37 1333 aaKnown RBP14.96□□□□□ -0.02
Msh6-201ENSMUST00000005503 Arhgef11Q68FM7 1552 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Fhod3Q76LL6 1578 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Atg4a-psA0A0G2JFS9 396 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Gas2l3Q3UWW6 683 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Atg4aQ8C9S8 396 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Kif21aQ9QXL2 1672 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Zscan25B2RX31 543 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Cct2P80314 535 aaKnown RBP14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Pdzrn3Q69ZS0 1063 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 SrrtQ99MR6 875 aaKnown RBP14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tarbp1E9Q368 1579 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Slu7Q8BHJ9 585 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Pms1Q8K119 917 aa14.95□□□□□ -0.02
Msh6-201ENSMUST00000005503 Bin1O08539 588 aaKnown RBP14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Q3UJC8 639 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Jarid2Q62315 1234 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Kdm4aQ8BW72 1064 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Otud6bQ8K2H2 294 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Trim25Q61510 634 aaKnown RBP14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Fam193aQ8CGI1 1231 aaKnown RBP14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Zpr1Q62384 459 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tmco3Q8BH01 678 aa14.94□□□□□ -0.02
Msh6-201ENSMUST00000005503 CrcpO35427 148 aa14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Cavin2Q63918 418 aaKnown RBP14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Krt82Q99M74 516 aa14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Pa2g4P50580 394 aaKnown RBP14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tpm1P58771 284 aa14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Nucb2P81117 420 aa14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Znhit6Q3UFB2 460 aaKnown RBP14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ltv1Q6NSQ7 470 aaKnown RBP14.93□□□□□ -0.02
Msh6-201ENSMUST00000005503 Atp8b2P98199 1209 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ccdc102aQ3TMW1 549 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Mindy4Q3UQI9 744 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Spty2d1Q68FG3 682 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tmem132eQ6IEE6 982 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Mlh1Q9JK91 760 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Dnajc2P54103 621 aaKnown RBP14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Prpf4bQ61136 1007 aaKnown RBP14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ccdc155Q80VJ8 648 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Zbtb3Q91X45 518 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ndufa8Q9DCJ5 172 aa14.92□□□□□ -0.02
Msh6-201ENSMUST00000005503 Nphp4P59240 1425 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Nup160Q9Z0W3 1402 aaKnown RBP14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ppfia1B2RXQ2 1266 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Zbtb21E9Q444 1094 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Gnl2Q99LH1 728 aaKnown RBP14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Col17a1Q07563 1470 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Igbp1bQ9QZ29 343 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 ScaperF8VQ70 1398 aaKnown RBP14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tpx2A2APB8 745 aaKnown RBP14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 OvosQ3UU35 1456 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Ano6Q6P9J9 911 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Tsr2Q8C8T8 191 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Evc2Q8K1G2 1220 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 TefQ9JLC6 301 aa14.91□□□□□ -0.02
Msh6-201ENSMUST00000005503 Mcmdc2E9Q956 681 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Abl1P00520 1123 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Rbm8a2A0A0N4SUH6 174 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 MlecQ6ZQI3 291 aaKnown RBP14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Rbm8aQ9CWZ3 174 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Bag3Q9JLV1 577 aaKnown RBP14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Dot1lQ6XZL8 1540 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Syt1P46096 421 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Rhot2Q8JZN7 620 aa14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 Rrs1Q9CYH6 365 aaKnown RBP14.9□□□□□ -0.02
Msh6-201ENSMUST00000005503 GpkowQ56A08 488 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Grpel1Q99LP6 217 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Rbm28Q8CGC6 750 aaKnown RBP14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Aldh1l2Q8K009 923 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Plch2A2AP18 1501 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Adamts12Q811B3 1600 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Bag1Q60739 355 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Tmx1Q8VBT0 278 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Tubb6Q922F4 447 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 PalldQ9ET54 1408 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Gapvd1Q6PAR5 1458 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Map3k2Q61083 619 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Lamb3Q61087 1168 aa14.89□□□□□ -0.03
Msh6-201ENSMUST00000005503 Cers3Q1A3B0 383 aa14.88□□□□□ -0.03
Msh6-201ENSMUST00000005503 Esyt1Q3U7R1 1092 aaKnown RBP14.88□□□□□ -0.03
Msh6-201ENSMUST00000005503 Eif3aP23116 1344 aaKnown RBP14.88□□□□□ -0.03
Msh6-201ENSMUST00000005503 Tyro3P55144 880 aa14.88□□□□□ -0.03
Msh6-201ENSMUST00000005503 HdgfP51859 237 aaKnown RBP14.88□□□□□ -0.03
Msh6-201ENSMUST00000005503 Tti2Q8BGV4 512 aa14.87□□□□□ -0.03
Msh6-201ENSMUST00000005503 Znf521Q6KAS7 1311 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms