Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 CROCCP3-202ENST00000420820 1947 ntBASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 AL049597.2-201ENST00000565575 961 ntBASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A3BPQ9Y5P4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AC104076.2-201ENST00000448912 469 ntBASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AC006011.2-201ENST00000621313 1158 ntBASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AL138966.2-201ENST00000621997 464 ntBASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL4A3BPQ9Y5P4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 KRT8P3-201ENST00000519669 1449 ntBASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 BX664615.1-201ENST00000443558 458 ntBASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL4A3BPQ9Y5P4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 RNF165-205ENST00000588679 2904 ntBASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.97■□□□□ 0.95
COL4A3BPQ9Y5P4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL4A3BPQ9Y5P4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL4A3BPQ9Y5P4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL4A3BPQ9Y5P4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL4A3BPQ9Y5P4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms