Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHB1Q9Y5F3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 LINC01238-205ENST00000567549 1107 ntBASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 AC091076.1-201ENST00000610741 619 ntBASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 AC083906.6-201ENST00000641366 219 ntBASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHB1Q9Y5F3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 CROCCP3-202ENST00000420820 1947 ntBASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 AC008040.2-201ENST00000461049 708 ntBASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB1Q9Y5F3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB1Q9Y5F3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB1Q9Y5F3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 AC093525.10-201ENST00000625130 1569 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 AC093503.3-201ENST00000624917 2352 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 HMGA1P5-201ENST00000412453 271 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CKBP1-201ENST00000565489 1086 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 AP000692.2-201ENST00000608391 879 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 MYC-208ENST00000641036 567 ntBASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHB1Q9Y5F3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB1Q9Y5F3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms