Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 AC079781.3-201ENST00000449110 356 ntBASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 AC074051.2-201ENST00000565115 352 ntBASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 Z69720.1-201ENST00000601483 472 ntBASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.98■■■□□ 2.23
CDK11AQ9UQ88 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 IGHGP-201ENST00000390555 1178 ntBASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 AC106795.1-205ENST00000512851 1056 ntBASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 BMF-207ENST00000559701 630 ntTSL 3 BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CDK11AQ9UQ88 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 TEN1-204ENST00000588202 862 ntTSL 3 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC28.96■■■□□ 2.23
CDK11AQ9UQ88 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
CDK11AQ9UQ88 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
CDK11AQ9UQ88 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 NAT14-202ENST00000587400 416 ntTSL 5 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 CYP51A1P1-201ENST00000492267 1507 ntBASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC28.94■■■□□ 2.22
CDK11AQ9UQ88 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 AP002469.2-201ENST00000531724 424 ntBASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 AC024563.2-201ENST00000603282 481 ntBASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.93■■■□□ 2.22
CDK11AQ9UQ88 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
CDK11AQ9UQ88 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms