Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NOTCH3Q9UM47 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 BX119927.1-201ENST00000636596 1552 ntBASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NOTCH3Q9UM47 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AC092597.1-201ENST00000487352 616 ntBASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AP003041.3-201ENST00000527151 707 ntBASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 SPDYE15P-201ENST00000424157 909 ntBASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 AP001271.2-201ENST00000624018 1556 ntBASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NOTCH3Q9UM47 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NOTCH3Q9UM47 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms