Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AC093484.2-201ENST00000580996 2166 ntBASIC18.68■□□□□ 0.58
SPASTQ9UBP0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 TSPY21P-201ENST00000433481 731 ntBASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPASTQ9UBP0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AL441883.1-201ENST00000566170 1045 ntBASIC18.67■□□□□ 0.58
SPASTQ9UBP0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AL358472.4-201ENST00000633140 710 ntBASIC18.67■□□□□ 0.58
SPASTQ9UBP0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 BCL2-203ENST00000589955 5011 ntBASIC18.67■□□□□ 0.58
SPASTQ9UBP0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPASTQ9UBP0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 AC090340.1-201ENST00000620778 4980 ntBASIC18.66■□□□□ 0.58
SPASTQ9UBP0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPASTQ9UBP0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPASTQ9UBP0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms