Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 COX11P1-201ENST00000489116 835 ntBASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPHK1Q9NYA1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 AC006333.2-201ENST00000607957 2099 ntBASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPHK1Q9NYA1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 DUX4L26-201ENST00000489078 1255 ntBASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 YBX1P2-201ENST00000489612 999 ntBASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 AC011558.1-201ENST00000623459 338 ntBASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 HEIH-201ENST00000623091 1652 ntBASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.08■□□□□ 0.48
SPHK1Q9NYA1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 MIR1224-201ENST00000408193 85 ntBASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 AK4P3-201ENST00000418260 669 ntBASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPHK1Q9NYA1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AL049597.2-201ENST00000565575 961 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AL441883.1-201ENST00000566170 1045 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC010331.1-201ENST00000611423 582 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 AC083906.6-201ENST00000641366 219 ntBASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK1Q9NYA1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms