Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 AC126763.1-201ENST00000552015 2118 ntBASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 Z99916.2-201ENST00000604037 246 ntBASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 LINC01023-201ENST00000606054 436 ntBASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 AL589743.5-201ENST00000616611 1050 ntBASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.88■□□□□ 0.45
CCM2LQ9NUG4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 KRT18P21-201ENST00000515767 1272 ntBASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 KRT17P1-201ENST00000399211 1546 ntBASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCM2LQ9NUG4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCM2LQ9NUG4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCM2LQ9NUG4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms