Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PCDHB16Q9NRJ7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 AC069152.1-201ENST00000438030 544 ntBASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 MYC-209ENST00000641252 345 ntBASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 SDHAP1-207ENST00000440850 2000 ntBASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 AL390961.4-201ENST00000623958 2535 ntBASIC16.33■□□□□ 0.2
PCDHB16Q9NRJ7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 AC008687.6-201ENST00000596318 630 ntBASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 AL356309.3-201ENST00000624132 1934 ntBASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 AC093525.10-201ENST00000625130 1569 ntBASIC16.32■□□□□ 0.2
PCDHB16Q9NRJ7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 AL355802.2-201ENST00000402069 882 ntBASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 TSPY21P-201ENST00000433481 731 ntBASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB16Q9NRJ7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms