Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX4Q9NQI0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 TSPY22P-201ENST00000427496 604 ntBASIC22.16■■□□□ 1.14
DDX4Q9NQI0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 AC034236.2-201ENST00000606662 1610 ntBASIC22.16■■□□□ 1.14
DDX4Q9NQI0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX4Q9NQI0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DDX4Q9NQI0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.14■■□□□ 1.14
DDX4Q9NQI0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 MIR3652-201ENST00000579335 131 ntBASIC22.14■■□□□ 1.13
DDX4Q9NQI0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.14■■□□□ 1.13
DDX4Q9NQI0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 CHCHD2P8-201ENST00000429873 447 ntBASIC22.13■■□□□ 1.13
DDX4Q9NQI0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms