Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPAP3Q9H6T3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 AC141586.3-201ENST00000562166 1838 ntBASIC21.62■■□□□ 1.05
RPAP3Q9H6T3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 FP475955.4-201ENST00000623131 1990 ntBASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 KRT18P1-202ENST00000452408 1331 ntBASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPAP3Q9H6T3 AC006333.2-201ENST00000607957 2099 ntBASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 AC034236.2-201ENST00000606662 1610 ntBASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RPAP3Q9H6T3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RPAP3Q9H6T3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms