Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SSBP3Q9BWW4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AC117947.1-201ENST00000427448 529 ntBASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 KRT8P3-201ENST00000519669 1449 ntBASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AC020763.4-201ENST00000623414 4170 ntBASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 AC141586.3-201ENST00000562166 1838 ntBASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.66■□□□□ 0.1
SSBP3Q9BWW4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC116562.4-201ENST00000641316 2276 ntBASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC140113.3-201ENST00000605663 199 ntBASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC139887.4-201ENST00000607877 719 ntBASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SSBP3Q9BWW4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SSBP3Q9BWW4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.64■□□□□ 0.1
SSBP3Q9BWW4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 HCG11-201ENST00000411553 5696 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 RNF152P1-201ENST00000397754 604 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 FEM1AP3-201ENST00000403722 1741 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 MCCD1P1-208ENST00000445732 328 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 YBX1P2-201ENST00000489612 999 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 MIR4674-201ENST00000582457 87 ntBASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.64■□□□□ 0.09
SSBP3Q9BWW4 AL445228.2-201ENST00000605589 952 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms