Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.8■□□□□ 0.12
FOXC2Q99958 VENTXP7-201ENST00000475503 772 ntBASIC15.8■□□□□ 0.12
FOXC2Q99958 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.8■□□□□ 0.12
FOXC2Q99958 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 AF238378.1-201ENST00000526806 358 ntBASIC15.8■□□□□ 0.12
FOXC2Q99958 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.8■□□□□ 0.12
FOXC2Q99958 TERC-201ENST00000602385 541 ntBASIC15.8■□□□□ 0.12
FOXC2Q99958 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 FEM1AP4-201ENST00000443167 1987 ntBASIC15.8■□□□□ 0.12
FOXC2Q99958 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FOXC2Q99958 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
FOXC2Q99958 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXC2Q99958 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
FOXC2Q99958 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FOXC2Q99958 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
FOXC2Q99958 AL031284.1-201ENST00000419297 478 ntBASIC15.79■□□□□ 0.12
FOXC2Q99958 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.79■□□□□ 0.12
FOXC2Q99958 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 AP003733.1-201ENST00000491725 852 ntBASIC15.79■□□□□ 0.12
FOXC2Q99958 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.79■□□□□ 0.12
FOXC2Q99958 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.79■□□□□ 0.12
FOXC2Q99958 AL390719.2-201ENST00000606993 987 ntBASIC15.79■□□□□ 0.12
FOXC2Q99958 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.79■□□□□ 0.12
FOXC2Q99958 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
FOXC2Q99958 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
FOXC2Q99958 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FOXC2Q99958 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXC2Q99958 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
FOXC2Q99958 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
FOXC2Q99958 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
FOXC2Q99958 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXC2Q99958 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 KRT18P67-201ENST00000432816 1264 ntBASIC15.78■□□□□ 0.12
FOXC2Q99958 FAM197Y8-203ENST00000450145 560 ntBASIC15.78■□□□□ 0.12
FOXC2Q99958 AF186996.4-201ENST00000467186 377 ntBASIC15.78■□□□□ 0.12
FOXC2Q99958 POLD2P1-201ENST00000511220 997 ntBASIC15.78■□□□□ 0.12
FOXC2Q99958 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXC2Q99958 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.78■□□□□ 0.12
FOXC2Q99958 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.78■□□□□ 0.12
FOXC2Q99958 TP73-AS1-207ENST00000624167 988 ntBASIC15.78■□□□□ 0.12
FOXC2Q99958 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXC2Q99958 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
FOXC2Q99958 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.78■□□□□ 0.12
FOXC2Q99958 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
FOXC2Q99958 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXC2Q99958 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms