Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PHOX2BQ99453 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.96■□□□□ 0.63
PHOX2BQ99453 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 AC004967.1-201ENST00000453589 447 ntBASIC18.95■□□□□ 0.62
PHOX2BQ99453 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 AC134684.3-201ENST00000641758 218 ntBASIC18.95■□□□□ 0.62
PHOX2BQ99453 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.95■□□□□ 0.62
PHOX2BQ99453 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PHOX2BQ99453 AC233702.3-201ENST00000578656 1387 ntBASIC18.94■□□□□ 0.62
PHOX2BQ99453 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 HLA-F-220ENST00000434407 884 ntBASIC18.94■□□□□ 0.62
PHOX2BQ99453 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
PHOX2BQ99453 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PHOX2BQ99453 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 AC006128.1-201ENST00000624704 1661 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 MIR662-201ENST00000384847 95 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 FAM8A3P-201ENST00000427218 844 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 AF186996.4-201ENST00000467186 377 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 AC092364.2-202ENST00000597012 1073 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 AC083906.6-201ENST00000641366 219 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 AC079781.4-201ENST00000641908 219 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PHOX2BQ99453 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PHOX2BQ99453 KRT8P41-201ENST00000533985 1514 ntBASIC18.93■□□□□ 0.62
PHOX2BQ99453 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms